Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CHRNA1P02708 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA1P02708 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA1P02708 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.04■□□□□ 0.96
CHRNA1P02708 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CHRNA1P02708 AC104417.2-201ENST00000562989 1793 ntBASIC21.03■□□□□ 0.96
CHRNA1P02708 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHRNA1P02708 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CHRNA1P02708 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHRNA1P02708 PCED1CP-201ENST00000419887 785 ntBASIC21.03■□□□□ 0.96
CHRNA1P02708 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHRNA1P02708 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.03■□□□□ 0.96
CHRNA1P02708 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.03■□□□□ 0.96
CHRNA1P02708 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CHRNA1P02708 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CHRNA1P02708 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHRNA1P02708 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CHRNA1P02708 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHRNA1P02708 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.02■□□□□ 0.96
CHRNA1P02708 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHRNA1P02708 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHRNA1P02708 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHRNA1P02708 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CHRNA1P02708 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.02■□□□□ 0.96
CHRNA1P02708 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.02■□□□□ 0.96
CHRNA1P02708 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHRNA1P02708 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC21.02■□□□□ 0.96
CHRNA1P02708 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.02■□□□□ 0.96
CHRNA1P02708 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC21.02■□□□□ 0.96
CHRNA1P02708 AC008622.2-201ENST00000617006 1229 ntBASIC21.02■□□□□ 0.96
CHRNA1P02708 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHRNA1P02708 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.02■□□□□ 0.96
CHRNA1P02708 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHRNA1P02708 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHRNA1P02708 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHRNA1P02708 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CHRNA1P02708 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CHRNA1P02708 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.02■□□□□ 0.96
CHRNA1P02708 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CHRNA1P02708 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CHRNA1P02708 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.02■□□□□ 0.95
CHRNA1P02708 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CHRNA1P02708 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CHRNA1P02708 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHRNA1P02708 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHRNA1P02708 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CHRNA1P02708 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHRNA1P02708 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHRNA1P02708 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.01■□□□□ 0.95
CHRNA1P02708 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CHRNA1P02708 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHRNA1P02708 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CHRNA1P02708 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHRNA1P02708 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.01■□□□□ 0.95
CHRNA1P02708 AL671277.2-201ENST00000458060 996 ntBASIC21.01■□□□□ 0.95
CHRNA1P02708 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC21.01■□□□□ 0.95
CHRNA1P02708 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHRNA1P02708 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHRNA1P02708 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.01■□□□□ 0.95
CHRNA1P02708 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CHRNA1P02708 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.01■□□□□ 0.95
CHRNA1P02708 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.01■□□□□ 0.95
CHRNA1P02708 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHRNA1P02708 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHRNA1P02708 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHRNA1P02708 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHRNA1P02708 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHRNA1P02708 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CHRNA1P02708 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CHRNA1P02708 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHRNA1P02708 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CHRNA1P02708 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.01■□□□□ 0.95
CHRNA1P02708 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHRNA1P02708 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHRNA1P02708 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21■□□□□ 0.95
CHRNA1P02708 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHRNA1P02708 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHRNA1P02708 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC21■□□□□ 0.95
CHRNA1P02708 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CHRNA1P02708 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21■□□□□ 0.95
CHRNA1P02708 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21■□□□□ 0.95
CHRNA1P02708 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21■□□□□ 0.95
CHRNA1P02708 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21■□□□□ 0.95
CHRNA1P02708 METTL23-204ENST00000586752 904 ntTSL 2 BASIC21■□□□□ 0.95
CHRNA1P02708 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21■□□□□ 0.95
CHRNA1P02708 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CHRNA1P02708 TBC1D3P2-202ENST00000577902 1649 ntBASIC21■□□□□ 0.95
CHRNA1P02708 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CHRNA1P02708 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21■□□□□ 0.95
CHRNA1P02708 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21■□□□□ 0.95
CHRNA1P02708 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHRNA1P02708 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHRNA1P02708 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHRNA1P02708 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHRNA1P02708 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.99■□□□□ 0.95
CHRNA1P02708 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CHRNA1P02708 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHRNA1P02708 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.99■□□□□ 0.95
CHRNA1P02708 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CHRNA1P02708 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms