Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LMNAP02545 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
LMNAP02545 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LMNAP02545 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.13■□□□□ 0.81
LMNAP02545 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.13■□□□□ 0.81
LMNAP02545 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.13■□□□□ 0.81
LMNAP02545 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
LMNAP02545 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.13■□□□□ 0.81
LMNAP02545 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LMNAP02545 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
LMNAP02545 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
LMNAP02545 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LMNAP02545 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.13■□□□□ 0.81
LMNAP02545 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LMNAP02545 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.13■□□□□ 0.81
LMNAP02545 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
LMNAP02545 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
LMNAP02545 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LMNAP02545 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LMNAP02545 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.12■□□□□ 0.81
LMNAP02545 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LMNAP02545 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
LMNAP02545 AL450487.1-201ENST00000426799 995 ntBASIC20.12■□□□□ 0.81
LMNAP02545 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.12■□□□□ 0.81
LMNAP02545 AC063952.2-201ENST00000498792 1227 ntBASIC20.12■□□□□ 0.81
LMNAP02545 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.12■□□□□ 0.81
LMNAP02545 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.12■□□□□ 0.81
LMNAP02545 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.12■□□□□ 0.81
LMNAP02545 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.12■□□□□ 0.81
LMNAP02545 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LMNAP02545 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LMNAP02545 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LMNAP02545 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LMNAP02545 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LMNAP02545 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
LMNAP02545 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.12■□□□□ 0.81
LMNAP02545 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
LMNAP02545 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LMNAP02545 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
LMNAP02545 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LMNAP02545 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.11■□□□□ 0.81
LMNAP02545 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMNAP02545 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
LMNAP02545 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMNAP02545 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMNAP02545 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.11■□□□□ 0.81
LMNAP02545 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMNAP02545 TNXA-203ENST00000507684 2038 ntBASIC20.11■□□□□ 0.81
LMNAP02545 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMNAP02545 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
LMNAP02545 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMNAP02545 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LMNAP02545 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LMNAP02545 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.11■□□□□ 0.81
LMNAP02545 BX664615.1-201ENST00000443558 458 ntBASIC20.11■□□□□ 0.81
LMNAP02545 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.11■□□□□ 0.81
LMNAP02545 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
LMNAP02545 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.11■□□□□ 0.81
LMNAP02545 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.11■□□□□ 0.81
LMNAP02545 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
LMNAP02545 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.11■□□□□ 0.81
LMNAP02545 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMNAP02545 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMNAP02545 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMNAP02545 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMNAP02545 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.11■□□□□ 0.81
LMNAP02545 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMNAP02545 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
LMNAP02545 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
LMNAP02545 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LMNAP02545 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LMNAP02545 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LMNAP02545 AC116562.4-201ENST00000641316 2276 ntBASIC20.1■□□□□ 0.81
LMNAP02545 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LMNAP02545 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LMNAP02545 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LMNAP02545 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LMNAP02545 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LMNAP02545 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
LMNAP02545 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.1■□□□□ 0.81
LMNAP02545 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.1■□□□□ 0.81
LMNAP02545 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.1■□□□□ 0.81
LMNAP02545 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.1■□□□□ 0.81
LMNAP02545 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.1■□□□□ 0.81
LMNAP02545 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
LMNAP02545 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.1■□□□□ 0.81
LMNAP02545 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LMNAP02545 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.1■□□□□ 0.81
LMNAP02545 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
LMNAP02545 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LMNAP02545 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
LMNAP02545 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.1■□□□□ 0.81
LMNAP02545 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LMNAP02545 PLK5-205ENST00000642079 1969 ntBASIC20.1■□□□□ 0.81
LMNAP02545 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LMNAP02545 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LMNAP02545 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
LMNAP02545 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
LMNAP02545 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LMNAP02545 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms