Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.29■□□□□ 0.04
IFNA1P01562 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFNA1P01562 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.29■□□□□ 0.04
IFNA1P01562 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
IFNA1P01562 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFNA1P01562 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC15.29■□□□□ 0.04
IFNA1P01562 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
IFNA1P01562 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IFNA1P01562 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFNA1P01562 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFNA1P01562 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC15.29■□□□□ 0.04
IFNA1P01562 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC15.29■□□□□ 0.04
IFNA1P01562 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFNA1P01562 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFNA1P01562 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFNA1P01562 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC15.29■□□□□ 0.04
IFNA1P01562 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFNA1P01562 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFNA1P01562 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFNA1P01562 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.29■□□□□ 0.04
IFNA1P01562 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFNA1P01562 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFNA1P01562 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IFNA1P01562 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC15.29■□□□□ 0.04
IFNA1P01562 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
IFNA1P01562 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.29■□□□□ 0.04
IFNA1P01562 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.29■□□□□ 0.04
IFNA1P01562 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
IFNA1P01562 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.29■□□□□ 0.04
IFNA1P01562 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
IFNA1P01562 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
IFNA1P01562 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
IFNA1P01562 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC15.28■□□□□ 0.04
IFNA1P01562 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 PGM5P4-201ENST00000421970 445 ntBASIC15.28■□□□□ 0.04
IFNA1P01562 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC15.28■□□□□ 0.04
IFNA1P01562 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
IFNA1P01562 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
IFNA1P01562 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
IFNA1P01562 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
IFNA1P01562 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.28■□□□□ 0.04
IFNA1P01562 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
IFNA1P01562 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
IFNA1P01562 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.28■□□□□ 0.04
IFNA1P01562 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFNA1P01562 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFNA1P01562 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.27■□□□□ 0.04
IFNA1P01562 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.27■□□□□ 0.04
IFNA1P01562 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
IFNA1P01562 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.27■□□□□ 0.04
IFNA1P01562 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFNA1P01562 AC141586.3-201ENST00000562166 1838 ntBASIC15.27■□□□□ 0.04
IFNA1P01562 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC15.27■□□□□ 0.04
IFNA1P01562 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
IFNA1P01562 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
IFNA1P01562 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFNA1P01562 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
IFNA1P01562 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
IFNA1P01562 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC15.27■□□□□ 0.04
IFNA1P01562 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IFNA1P01562 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IFNA1P01562 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IFNA1P01562 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
IFNA1P01562 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.27■□□□□ 0.03
IFNA1P01562 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IFNA1P01562 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IFNA1P01562 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.27■□□□□ 0.03
IFNA1P01562 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
IFNA1P01562 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC15.27■□□□□ 0.03
IFNA1P01562 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IFNA1P01562 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.27■□□□□ 0.03
IFNA1P01562 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
IFNA1P01562 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.26■□□□□ 0.03
IFNA1P01562 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
IFNA1P01562 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms