Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.45■□□□□ 0.7
PDGFBP01127 KRT16P4-201ENST00000453883 522 ntBASIC19.45■□□□□ 0.7
PDGFBP01127 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.45■□□□□ 0.7
PDGFBP01127 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.45■□□□□ 0.7
PDGFBP01127 LINC01711-201ENST00000598340 967 ntBASIC19.45■□□□□ 0.7
PDGFBP01127 AL121912.1-201ENST00000603683 238 ntBASIC19.45■□□□□ 0.7
PDGFBP01127 AC024243.1-201ENST00000609234 778 ntBASIC19.45■□□□□ 0.7
PDGFBP01127 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.45■□□□□ 0.7
PDGFBP01127 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.45■□□□□ 0.7
PDGFBP01127 AC117500.6-201ENST00000624871 588 ntBASIC19.45■□□□□ 0.7
PDGFBP01127 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.45■□□□□ 0.7
PDGFBP01127 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFBP01127 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.45■□□□□ 0.7
PDGFBP01127 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFBP01127 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFBP01127 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFBP01127 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.45■□□□□ 0.7
PDGFBP01127 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFBP01127 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFBP01127 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFBP01127 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFBP01127 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PDGFBP01127 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PDGFBP01127 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
PDGFBP01127 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFBP01127 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.44■□□□□ 0.7
PDGFBP01127 MIR574-201ENST00000385209 96 ntBASIC19.44■□□□□ 0.7
PDGFBP01127 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PDGFBP01127 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.44■□□□□ 0.7
PDGFBP01127 AC092183.1-201ENST00000469884 875 ntBASIC19.44■□□□□ 0.7
PDGFBP01127 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.44■□□□□ 0.7
PDGFBP01127 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.44■□□□□ 0.7
PDGFBP01127 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.44■□□□□ 0.7
PDGFBP01127 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.44■□□□□ 0.7
PDGFBP01127 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PDGFBP01127 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFBP01127 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.44■□□□□ 0.7
PDGFBP01127 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFBP01127 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFBP01127 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.44■□□□□ 0.7
PDGFBP01127 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PDGFBP01127 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFBP01127 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFBP01127 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PDGFBP01127 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFBP01127 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.43■□□□□ 0.7
PDGFBP01127 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFBP01127 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFBP01127 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFBP01127 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFBP01127 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
PDGFBP01127 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PDGFBP01127 TOB2P1-201ENST00000469761 992 ntBASIC19.43■□□□□ 0.7
PDGFBP01127 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFBP01127 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.43■□□□□ 0.7
PDGFBP01127 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.43■□□□□ 0.7
PDGFBP01127 AC079602.3-201ENST00000623931 403 ntBASIC19.43■□□□□ 0.7
PDGFBP01127 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PDGFBP01127 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
PDGFBP01127 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.43■□□□□ 0.7
PDGFBP01127 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFBP01127 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFBP01127 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFBP01127 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PDGFBP01127 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFBP01127 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.42■□□□□ 0.7
PDGFBP01127 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.42■□□□□ 0.7
PDGFBP01127 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFBP01127 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PDGFBP01127 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFBP01127 AC093525.10-201ENST00000625130 1569 ntBASIC19.42■□□□□ 0.7
PDGFBP01127 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFBP01127 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFBP01127 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFBP01127 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.42■□□□□ 0.7
PDGFBP01127 TSPY22P-201ENST00000427496 604 ntBASIC19.42■□□□□ 0.7
PDGFBP01127 PMS2P1-201ENST00000431037 1228 ntBASIC19.42■□□□□ 0.7
PDGFBP01127 DRAXINP1-201ENST00000437611 948 ntBASIC19.42■□□□□ 0.7
PDGFBP01127 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PDGFBP01127 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.42■□□□□ 0.7
PDGFBP01127 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.42■□□□□ 0.7
PDGFBP01127 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.42■□□□□ 0.7
PDGFBP01127 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFBP01127 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFBP01127 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFBP01127 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFBP01127 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.42■□□□□ 0.7
PDGFBP01127 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.42■□□□□ 0.7
PDGFBP01127 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDGFBP01127 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFBP01127 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.41■□□□□ 0.7
PDGFBP01127 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.41■□□□□ 0.7
PDGFBP01127 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFBP01127 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFBP01127 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFBP01127 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.41■□□□□ 0.7
PDGFBP01127 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDGFBP01127 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PDGFBP01127 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.41■□□□□ 0.7
PDGFBP01127 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms