Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 SPEG-225ENST00000617028 815 ntTSL 5 BASIC22.07■■□□□ 1.12
ALDH1A1P00352 AC139530.3-201ENST00000620344 690 ntBASIC22.07■■□□□ 1.12
ALDH1A1P00352 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC22.07■■□□□ 1.12
ALDH1A1P00352 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ALDH1A1P00352 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ALDH1A1P00352 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
ALDH1A1P00352 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC22.07■■□□□ 1.12
ALDH1A1P00352 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC22.07■■□□□ 1.12
ALDH1A1P00352 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ALDH1A1P00352 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
ALDH1A1P00352 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ALDH1A1P00352 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC22.06■■□□□ 1.12
ALDH1A1P00352 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ALDH1A1P00352 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
ALDH1A1P00352 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ALDH1A1P00352 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC22.06■■□□□ 1.12
ALDH1A1P00352 AP000867.3-201ENST00000524675 377 ntBASIC22.06■■□□□ 1.12
ALDH1A1P00352 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.06■■□□□ 1.12
ALDH1A1P00352 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC22.06■■□□□ 1.12
ALDH1A1P00352 CALM3-211ENST00000598871 561 ntTSL 4 BASIC22.06■■□□□ 1.12
ALDH1A1P00352 WDR6-223ENST00000627177 207 ntTSL 2 BASIC22.06■■□□□ 1.12
ALDH1A1P00352 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC22.06■■□□□ 1.12
ALDH1A1P00352 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC22.06■■□□□ 1.12
ALDH1A1P00352 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ALDH1A1P00352 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ALDH1A1P00352 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
ALDH1A1P00352 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
ALDH1A1P00352 AC007225.1-201ENST00000566331 1836 ntBASIC22.06■■□□□ 1.12
ALDH1A1P00352 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
ALDH1A1P00352 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
ALDH1A1P00352 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
ALDH1A1P00352 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
ALDH1A1P00352 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ALDH1A1P00352 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ALDH1A1P00352 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ALDH1A1P00352 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC22.05■■□□□ 1.12
ALDH1A1P00352 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
ALDH1A1P00352 TSPY22P-201ENST00000427496 604 ntBASIC22.05■■□□□ 1.12
ALDH1A1P00352 BMF-207ENST00000559701 630 ntTSL 3 BASIC22.05■■□□□ 1.12
ALDH1A1P00352 TPSP2-201ENST00000561760 610 ntBASIC22.05■■□□□ 1.12
ALDH1A1P00352 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC22.05■■□□□ 1.12
ALDH1A1P00352 BX640515.1-201ENST00000617215 977 ntBASIC22.05■■□□□ 1.12
ALDH1A1P00352 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ALDH1A1P00352 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ALDH1A1P00352 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC22.05■■□□□ 1.12
ALDH1A1P00352 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ALDH1A1P00352 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ALDH1A1P00352 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ALDH1A1P00352 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
ALDH1A1P00352 LSR-203ENST00000360798 1963 ntTSL 2 BASIC22.05■■□□□ 1.12
ALDH1A1P00352 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
ALDH1A1P00352 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ALDH1A1P00352 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ALDH1A1P00352 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.12
ALDH1A1P00352 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
ALDH1A1P00352 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ALDH1A1P00352 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ALDH1A1P00352 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
ALDH1A1P00352 TEX30-205ENST00000376029 959 ntTSL 2 BASIC22.04■■□□□ 1.12
ALDH1A1P00352 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC22.04■■□□□ 1.12
ALDH1A1P00352 LINC00265-3P-201ENST00000447588 903 ntBASIC22.04■■□□□ 1.12
ALDH1A1P00352 FOSL1P1-201ENST00000511041 816 ntBASIC22.04■■□□□ 1.12
ALDH1A1P00352 CIB2-208ENST00000560618 804 ntTSL 2 BASIC22.04■■□□□ 1.12
ALDH1A1P00352 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC22.04■■□□□ 1.12
ALDH1A1P00352 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC22.04■■□□□ 1.12
ALDH1A1P00352 AC024243.1-201ENST00000609234 778 ntBASIC22.04■■□□□ 1.12
ALDH1A1P00352 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
ALDH1A1P00352 TBC1D3P2-202ENST00000577902 1649 ntBASIC22.04■■□□□ 1.12
ALDH1A1P00352 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ALDH1A1P00352 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ALDH1A1P00352 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ALDH1A1P00352 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC22.04■■□□□ 1.12
ALDH1A1P00352 AC006128.1-201ENST00000624704 1661 ntBASIC22.04■■□□□ 1.12
ALDH1A1P00352 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC22.03■■□□□ 1.12
ALDH1A1P00352 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC22.03■■□□□ 1.12
ALDH1A1P00352 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ALDH1A1P00352 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ALDH1A1P00352 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC22.03■■□□□ 1.12
ALDH1A1P00352 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC22.03■■□□□ 1.12
ALDH1A1P00352 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC22.03■■□□□ 1.12
ALDH1A1P00352 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC22.03■■□□□ 1.12
ALDH1A1P00352 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC22.03■■□□□ 1.12
ALDH1A1P00352 AL121912.1-201ENST00000603683 238 ntBASIC22.03■■□□□ 1.12
ALDH1A1P00352 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
ALDH1A1P00352 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
ALDH1A1P00352 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
ALDH1A1P00352 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ALDH1A1P00352 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.03■■□□□ 1.12
ALDH1A1P00352 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.02■■□□□ 1.12
ALDH1A1P00352 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC22.02■■□□□ 1.12
ALDH1A1P00352 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ALDH1A1P00352 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ALDH1A1P00352 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ALDH1A1P00352 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ALDH1A1P00352 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ALDH1A1P00352 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ALDH1A1P00352 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ALDH1A1P00352 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
ALDH1A1P00352 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ALDH1A1P00352 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms