Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TOP3BO95985 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TOP3BO95985 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
TOP3BO95985 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
TOP3BO95985 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.75■□□□□ 0.75
TOP3BO95985 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TOP3BO95985 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TOP3BO95985 PGM5P4-201ENST00000421970 445 ntBASIC19.75■□□□□ 0.75
TOP3BO95985 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.75■□□□□ 0.75
TOP3BO95985 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TOP3BO95985 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.75■□□□□ 0.75
TOP3BO95985 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.75■□□□□ 0.75
TOP3BO95985 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.75■□□□□ 0.75
TOP3BO95985 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
TOP3BO95985 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TOP3BO95985 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TOP3BO95985 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.75■□□□□ 0.75
TOP3BO95985 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TOP3BO95985 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.75■□□□□ 0.75
TOP3BO95985 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TOP3BO95985 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.75■□□□□ 0.75
TOP3BO95985 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.74■□□□□ 0.75
TOP3BO95985 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TOP3BO95985 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TOP3BO95985 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TOP3BO95985 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TOP3BO95985 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TOP3BO95985 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TOP3BO95985 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TOP3BO95985 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TOP3BO95985 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TOP3BO95985 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.74■□□□□ 0.75
TOP3BO95985 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TOP3BO95985 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TOP3BO95985 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TOP3BO95985 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TOP3BO95985 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.74■□□□□ 0.75
TOP3BO95985 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.74■□□□□ 0.75
TOP3BO95985 AL355355.2-201ENST00000442321 338 ntBASIC19.74■□□□□ 0.75
TOP3BO95985 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.74■□□□□ 0.75
TOP3BO95985 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TOP3BO95985 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.74■□□□□ 0.75
TOP3BO95985 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
TOP3BO95985 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.74■□□□□ 0.75
TOP3BO95985 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TOP3BO95985 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.74■□□□□ 0.75
TOP3BO95985 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.74■□□□□ 0.75
TOP3BO95985 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.74■□□□□ 0.75
TOP3BO95985 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TOP3BO95985 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TOP3BO95985 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.74■□□□□ 0.75
TOP3BO95985 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.73■□□□□ 0.75
TOP3BO95985 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.73■□□□□ 0.75
TOP3BO95985 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.73■□□□□ 0.75
TOP3BO95985 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TOP3BO95985 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
TOP3BO95985 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TOP3BO95985 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TOP3BO95985 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.73■□□□□ 0.75
TOP3BO95985 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.73■□□□□ 0.75
TOP3BO95985 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.73■□□□□ 0.75
TOP3BO95985 AC105020.6-201ENST00000621523 1217 ntBASIC19.73■□□□□ 0.75
TOP3BO95985 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.73■□□□□ 0.75
TOP3BO95985 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.73■□□□□ 0.75
TOP3BO95985 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TOP3BO95985 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.73■□□□□ 0.75
TOP3BO95985 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TOP3BO95985 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TOP3BO95985 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.72■□□□□ 0.75
TOP3BO95985 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TOP3BO95985 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TOP3BO95985 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.72■□□□□ 0.75
TOP3BO95985 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.72■□□□□ 0.75
TOP3BO95985 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TOP3BO95985 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
TOP3BO95985 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TOP3BO95985 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TOP3BO95985 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms