Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.04■□□□□ 0.32
ALX3O95076 AC008694.1-202ENST00000636953 945 ntBASIC17.04■□□□□ 0.32
ALX3O95076 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.04■□□□□ 0.32
ALX3O95076 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALX3O95076 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALX3O95076 AC009053.2-201ENST00000563701 2365 ntBASIC17.04■□□□□ 0.32
ALX3O95076 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.04■□□□□ 0.32
ALX3O95076 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.04■□□□□ 0.32
ALX3O95076 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.04■□□□□ 0.32
ALX3O95076 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
ALX3O95076 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALX3O95076 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALX3O95076 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALX3O95076 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
ALX3O95076 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.03■□□□□ 0.32
ALX3O95076 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC17.03■□□□□ 0.32
ALX3O95076 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
ALX3O95076 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.03■□□□□ 0.32
ALX3O95076 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.03■□□□□ 0.32
ALX3O95076 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ALX3O95076 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ALX3O95076 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.03■□□□□ 0.32
ALX3O95076 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.03■□□□□ 0.32
ALX3O95076 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ALX3O95076 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 AL512625.2-201ENST00000417533 625 ntBASIC17.03■□□□□ 0.32
ALX3O95076 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.03■□□□□ 0.32
ALX3O95076 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.03■□□□□ 0.32
ALX3O95076 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.03■□□□□ 0.32
ALX3O95076 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.03■□□□□ 0.32
ALX3O95076 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.03■□□□□ 0.32
ALX3O95076 AL589743.5-201ENST00000616611 1050 ntBASIC17.03■□□□□ 0.32
ALX3O95076 AC011767.1-201ENST00000617410 1153 ntBASIC17.03■□□□□ 0.32
ALX3O95076 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 AC068880.1-201ENST00000507289 2297 ntBASIC17.03■□□□□ 0.32
ALX3O95076 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.03■□□□□ 0.32
ALX3O95076 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ALX3O95076 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ALX3O95076 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ALX3O95076 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ALX3O95076 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.02■□□□□ 0.32
ALX3O95076 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ALX3O95076 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ALX3O95076 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALX3O95076 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALX3O95076 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.02■□□□□ 0.32
ALX3O95076 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ALX3O95076 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.02■□□□□ 0.32
ALX3O95076 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.02■□□□□ 0.32
ALX3O95076 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.02■□□□□ 0.32
ALX3O95076 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.02■□□□□ 0.32
ALX3O95076 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ALX3O95076 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
ALX3O95076 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.02■□□□□ 0.32
ALX3O95076 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
ALX3O95076 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ALX3O95076 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
ALX3O95076 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALX3O95076 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ALX3O95076 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALX3O95076 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.01■□□□□ 0.31
ALX3O95076 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALX3O95076 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.01■□□□□ 0.31
ALX3O95076 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.01■□□□□ 0.31
ALX3O95076 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
ALX3O95076 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.01■□□□□ 0.31
ALX3O95076 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.01■□□□□ 0.31
ALX3O95076 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALX3O95076 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALX3O95076 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
ALX3O95076 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
ALX3O95076 PHGDH-210ENST00000641115 1638 ntBASIC17.01■□□□□ 0.31
ALX3O95076 CYP2T1P-201ENST00000432607 1285 ntBASIC17.01■□□□□ 0.31
ALX3O95076 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.01■□□□□ 0.31
ALX3O95076 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.01■□□□□ 0.31
ALX3O95076 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.01■□□□□ 0.31
ALX3O95076 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
ALX3O95076 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.01■□□□□ 0.31
ALX3O95076 C2orf69P4-201ENST00000565394 541 ntBASIC17.01■□□□□ 0.31
ALX3O95076 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.01■□□□□ 0.31
ALX3O95076 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms