Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.96■□□□□ 0.47
SOX30O94993 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.96■□□□□ 0.47
SOX30O94993 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.46
SOX30O94993 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.96■□□□□ 0.46
SOX30O94993 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.96■□□□□ 0.46
SOX30O94993 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.96■□□□□ 0.46
SOX30O94993 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX30O94993 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.95■□□□□ 0.46
SOX30O94993 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX30O94993 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SOX30O94993 AC098818.2-201ENST00000564925 2320 ntBASIC17.95■□□□□ 0.46
SOX30O94993 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SOX30O94993 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.95■□□□□ 0.46
SOX30O94993 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX30O94993 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SOX30O94993 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.95■□□□□ 0.46
SOX30O94993 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX30O94993 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX30O94993 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.95■□□□□ 0.46
SOX30O94993 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SOX30O94993 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX30O94993 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX30O94993 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.95■□□□□ 0.46
SOX30O94993 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.95■□□□□ 0.46
SOX30O94993 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX30O94993 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SOX30O94993 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX30O94993 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX30O94993 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
SOX30O94993 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SOX30O94993 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.95■□□□□ 0.46
SOX30O94993 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SOX30O94993 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.95■□□□□ 0.46
SOX30O94993 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.95■□□□□ 0.46
SOX30O94993 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SOX30O94993 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.95■□□□□ 0.46
SOX30O94993 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX30O94993 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SOX30O94993 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SOX30O94993 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SOX30O94993 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SOX30O94993 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX30O94993 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
SOX30O94993 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SOX30O94993 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
SOX30O94993 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.94■□□□□ 0.46
SOX30O94993 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.94■□□□□ 0.46
SOX30O94993 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 POU5F1P3-201ENST00000428824 1078 ntBASIC17.94■□□□□ 0.46
SOX30O94993 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.94■□□□□ 0.46
SOX30O94993 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.94■□□□□ 0.46
SOX30O94993 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 C1QL1P1-201ENST00000568105 661 ntBASIC17.94■□□□□ 0.46
SOX30O94993 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.94■□□□□ 0.46
SOX30O94993 ITM2C-210ENST00000620962 501 ntBASIC17.94■□□□□ 0.46
SOX30O94993 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
SOX30O94993 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
SOX30O94993 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
SOX30O94993 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SOX30O94993 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
SOX30O94993 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
SOX30O94993 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.94■□□□□ 0.46
SOX30O94993 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
SOX30O94993 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
SOX30O94993 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
SOX30O94993 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX30O94993 AC141586.3-201ENST00000562166 1838 ntBASIC17.93■□□□□ 0.46
SOX30O94993 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SOX30O94993 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX30O94993 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SOX30O94993 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SOX30O94993 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.93■□□□□ 0.46
SOX30O94993 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.93■□□□□ 0.46
SOX30O94993 AC093827.2-201ENST00000512654 315 ntBASIC17.93■□□□□ 0.46
SOX30O94993 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SOX30O94993 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SOX30O94993 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SOX30O94993 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
SOX30O94993 RN7SL471P-201ENST00000580476 299 ntBASIC17.93■□□□□ 0.46
SOX30O94993 AC110285.5-201ENST00000611501 352 ntBASIC17.93■□□□□ 0.46
SOX30O94993 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.93■□□□□ 0.46
SOX30O94993 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms