Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC30.16■■■□□ 2.42
PCF11O94913 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC30.16■■■□□ 2.42
PCF11O94913 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PCF11O94913 SPDYE15P-201ENST00000424157 909 ntBASIC30.16■■■□□ 2.42
PCF11O94913 LINC01238-205ENST00000567549 1107 ntBASIC30.16■■■□□ 2.42
PCF11O94913 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC30.16■■■□□ 2.42
PCF11O94913 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
PCF11O94913 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC30.16■■■□□ 2.42
PCF11O94913 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
PCF11O94913 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
PCF11O94913 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC30.16■■■□□ 2.42
PCF11O94913 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC30.15■■■□□ 2.42
PCF11O94913 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC30.15■■■□□ 2.42
PCF11O94913 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC30.15■■■□□ 2.42
PCF11O94913 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
PCF11O94913 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC30.15■■■□□ 2.42
PCF11O94913 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
PCF11O94913 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC30.15■■■□□ 2.42
PCF11O94913 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
PCF11O94913 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC30.15■■■□□ 2.42
PCF11O94913 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PCF11O94913 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PCF11O94913 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC30.15■■■□□ 2.42
PCF11O94913 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PCF11O94913 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC30.15■■■□□ 2.42
PCF11O94913 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
PCF11O94913 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC30.15■■■□□ 2.42
PCF11O94913 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
PCF11O94913 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC30.15■■■□□ 2.42
PCF11O94913 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
PCF11O94913 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PCF11O94913 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC30.15■■■□□ 2.42
PCF11O94913 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PCF11O94913 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
PCF11O94913 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.42
PCF11O94913 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PCF11O94913 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
PCF11O94913 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC30.14■■■□□ 2.42
PCF11O94913 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC30.14■■■□□ 2.42
PCF11O94913 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
PCF11O94913 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC30.14■■■□□ 2.42
PCF11O94913 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PCF11O94913 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
PCF11O94913 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC30.14■■■□□ 2.42
PCF11O94913 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC30.14■■■□□ 2.42
PCF11O94913 ETFA-216ENST00000560726 942 ntTSL 3 BASIC30.14■■■□□ 2.42
PCF11O94913 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC30.14■■■□□ 2.42
PCF11O94913 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
PCF11O94913 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.42
PCF11O94913 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PCF11O94913 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
PCF11O94913 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
PCF11O94913 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
PCF11O94913 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
PCF11O94913 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PCF11O94913 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC30.13■■■□□ 2.41
PCF11O94913 COPS8-203ENST00000409334 794 ntTSL 5 BASIC30.13■■■□□ 2.41
PCF11O94913 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PCF11O94913 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC30.13■■■□□ 2.41
PCF11O94913 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PCF11O94913 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC30.13■■■□□ 2.41
PCF11O94913 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
PCF11O94913 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PCF11O94913 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
PCF11O94913 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
PCF11O94913 BET1L-202ENST00000332865 533 ntTSL 5 BASIC30.12■■■□□ 2.41
PCF11O94913 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PCF11O94913 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PCF11O94913 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC30.12■■■□□ 2.41
PCF11O94913 AC011558.1-201ENST00000623459 338 ntBASIC30.12■■■□□ 2.41
PCF11O94913 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
PCF11O94913 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PCF11O94913 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
PCF11O94913 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC30.12■■■□□ 2.41
PCF11O94913 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC30.12■■■□□ 2.41
PCF11O94913 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC30.12■■■□□ 2.41
PCF11O94913 GOLGA6L5P-202ENST00000515341 1828 ntBASIC30.12■■■□□ 2.41
PCF11O94913 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC30.12■■■□□ 2.41
PCF11O94913 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC30.11■■■□□ 2.41
PCF11O94913 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PCF11O94913 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PCF11O94913 AC092647.4-201ENST00000457211 535 ntBASIC30.11■■■□□ 2.41
PCF11O94913 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC30.11■■■□□ 2.41
PCF11O94913 CLDN5-201ENST00000403084 2357 ntBASIC30.11■■■□□ 2.41
PCF11O94913 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC30.11■■■□□ 2.41
PCF11O94913 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
PCF11O94913 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC30.11■■■□□ 2.41
PCF11O94913 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PCF11O94913 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PCF11O94913 TSPY5P-201ENST00000426936 936 ntBASIC30.11■■■□□ 2.41
PCF11O94913 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
PCF11O94913 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC30.11■■■□□ 2.41
PCF11O94913 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC30.11■■■□□ 2.41
PCF11O94913 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC30.11■■■□□ 2.41
PCF11O94913 AP000550.4-202ENST00000639755 178 ntBASIC30.11■■■□□ 2.41
PCF11O94913 AC036111.1-201ENST00000533973 1582 ntBASIC30.11■■■□□ 2.41
PCF11O94913 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
PCF11O94913 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC30.1■■■□□ 2.41
PCF11O94913 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC30.1■■■□□ 2.41
PCF11O94913 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms