Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.85■□□□□ 0.29
UPK1BO75841 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1BO75841 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1BO75841 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.85■□□□□ 0.29
UPK1BO75841 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1BO75841 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1BO75841 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.85■□□□□ 0.29
UPK1BO75841 LSM4-201ENST00000252816 986 ntTSL 2 BASIC16.85■□□□□ 0.29
UPK1BO75841 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC16.85■□□□□ 0.29
UPK1BO75841 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
UPK1BO75841 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.85■□□□□ 0.29
UPK1BO75841 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.85■□□□□ 0.29
UPK1BO75841 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.85■□□□□ 0.29
UPK1BO75841 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1BO75841 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1BO75841 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
UPK1BO75841 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1BO75841 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.85■□□□□ 0.29
UPK1BO75841 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.85■□□□□ 0.29
UPK1BO75841 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
UPK1BO75841 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1BO75841 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1BO75841 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1BO75841 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
UPK1BO75841 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
UPK1BO75841 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1BO75841 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1BO75841 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1BO75841 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1BO75841 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1BO75841 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1BO75841 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1BO75841 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1BO75841 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1BO75841 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1BO75841 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1BO75841 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.84■□□□□ 0.29
UPK1BO75841 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1BO75841 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
UPK1BO75841 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.84■□□□□ 0.29
UPK1BO75841 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.84■□□□□ 0.29
UPK1BO75841 AL031848.2-201ENST00000607670 837 ntBASIC16.84■□□□□ 0.29
UPK1BO75841 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.84■□□□□ 0.29
UPK1BO75841 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1BO75841 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
UPK1BO75841 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1BO75841 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1BO75841 ANO7L1-203ENST00000602586 1720 ntBASIC16.84■□□□□ 0.29
UPK1BO75841 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1BO75841 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1BO75841 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
UPK1BO75841 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.84■□□□□ 0.29
UPK1BO75841 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
UPK1BO75841 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
UPK1BO75841 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
UPK1BO75841 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
UPK1BO75841 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
UPK1BO75841 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1BO75841 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
UPK1BO75841 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1BO75841 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1BO75841 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.83■□□□□ 0.28
UPK1BO75841 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1BO75841 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1BO75841 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.83■□□□□ 0.28
UPK1BO75841 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1BO75841 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1BO75841 RARRES2P2-201ENST00000394842 485 ntBASIC16.83■□□□□ 0.28
UPK1BO75841 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.83■□□□□ 0.28
UPK1BO75841 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
UPK1BO75841 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.83■□□□□ 0.28
UPK1BO75841 POU5F1P4-201ENST00000413175 1085 ntBASIC16.83■□□□□ 0.28
UPK1BO75841 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.83■□□□□ 0.28
UPK1BO75841 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
UPK1BO75841 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
UPK1BO75841 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.83■□□□□ 0.28
UPK1BO75841 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1BO75841 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
UPK1BO75841 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.83■□□□□ 0.28
UPK1BO75841 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1BO75841 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.83■□□□□ 0.28
UPK1BO75841 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
UPK1BO75841 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.83■□□□□ 0.28
UPK1BO75841 AL645608.8-201ENST00000606034 2086 ntBASIC16.83■□□□□ 0.28
UPK1BO75841 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.83■□□□□ 0.28
UPK1BO75841 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1BO75841 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1BO75841 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.83■□□□□ 0.28
UPK1BO75841 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1BO75841 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1BO75841 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1BO75841 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1BO75841 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.83■□□□□ 0.28
UPK1BO75841 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
UPK1BO75841 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.82■□□□□ 0.28
UPK1BO75841 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
UPK1BO75841 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1BO75841 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.82■□□□□ 0.28
UPK1BO75841 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.82■□□□□ 0.28
UPK1BO75841 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms