Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NDUFS3O75489 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NDUFS3O75489 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.25■□□□□ 0.67
NDUFS3O75489 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFS3O75489 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NDUFS3O75489 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFS3O75489 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NDUFS3O75489 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NDUFS3O75489 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
NDUFS3O75489 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS3O75489 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS3O75489 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS3O75489 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS3O75489 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.24■□□□□ 0.67
NDUFS3O75489 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS3O75489 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS3O75489 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS3O75489 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS3O75489 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS3O75489 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS3O75489 KRASP1-201ENST00000407852 552 ntBASIC19.24■□□□□ 0.67
NDUFS3O75489 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.24■□□□□ 0.67
NDUFS3O75489 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.24■□□□□ 0.67
NDUFS3O75489 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS3O75489 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.24■□□□□ 0.67
NDUFS3O75489 AC073648.6-201ENST00000641589 218 ntBASIC19.24■□□□□ 0.67
NDUFS3O75489 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NDUFS3O75489 AC104417.2-201ENST00000562989 1793 ntBASIC19.24■□□□□ 0.67
NDUFS3O75489 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS3O75489 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NDUFS3O75489 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.24■□□□□ 0.67
NDUFS3O75489 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS3O75489 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS3O75489 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NDUFS3O75489 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.24■□□□□ 0.67
NDUFS3O75489 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.23■□□□□ 0.67
NDUFS3O75489 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.23■□□□□ 0.67
NDUFS3O75489 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDUFS3O75489 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NDUFS3O75489 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDUFS3O75489 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NDUFS3O75489 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NDUFS3O75489 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDUFS3O75489 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.23■□□□□ 0.67
NDUFS3O75489 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDUFS3O75489 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDUFS3O75489 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
NDUFS3O75489 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.23■□□□□ 0.67
NDUFS3O75489 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.23■□□□□ 0.67
NDUFS3O75489 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.23■□□□□ 0.67
NDUFS3O75489 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.23■□□□□ 0.67
NDUFS3O75489 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.23■□□□□ 0.67
NDUFS3O75489 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
NDUFS3O75489 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NDUFS3O75489 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
NDUFS3O75489 MIR4651-201ENST00000582622 73 ntBASIC19.23■□□□□ 0.67
NDUFS3O75489 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
NDUFS3O75489 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NDUFS3O75489 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDUFS3O75489 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
NDUFS3O75489 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NDUFS3O75489 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
NDUFS3O75489 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDUFS3O75489 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.23■□□□□ 0.67
NDUFS3O75489 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NDUFS3O75489 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFS3O75489 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFS3O75489 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NDUFS3O75489 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFS3O75489 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFS3O75489 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
NDUFS3O75489 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFS3O75489 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
NDUFS3O75489 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFS3O75489 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.22■□□□□ 0.67
NDUFS3O75489 POU5F1P3-201ENST00000428824 1078 ntBASIC19.22■□□□□ 0.67
NDUFS3O75489 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFS3O75489 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFS3O75489 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.22■□□□□ 0.67
NDUFS3O75489 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFS3O75489 RN7SL471P-201ENST00000580476 299 ntBASIC19.22■□□□□ 0.67
NDUFS3O75489 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFS3O75489 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFS3O75489 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.22■□□□□ 0.67
NDUFS3O75489 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFS3O75489 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFS3O75489 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFS3O75489 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NDUFS3O75489 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFS3O75489 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.21■□□□□ 0.67
NDUFS3O75489 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.21■□□□□ 0.67
NDUFS3O75489 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.21■□□□□ 0.67
NDUFS3O75489 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
NDUFS3O75489 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFS3O75489 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFS3O75489 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFS3O75489 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFS3O75489 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFS3O75489 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NDUFS3O75489 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms