Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.4■□□□□ 0.38
PTP4A3O75365 FP475955.4-201ENST00000623131 1990 ntBASIC17.4■□□□□ 0.38
PTP4A3O75365 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.4■□□□□ 0.38
PTP4A3O75365 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A3O75365 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PTP4A3O75365 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
PTP4A3O75365 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PTP4A3O75365 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PTP4A3O75365 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A3O75365 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.39■□□□□ 0.37
PTP4A3O75365 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PTP4A3O75365 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A3O75365 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A3O75365 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A3O75365 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A3O75365 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A3O75365 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.39■□□□□ 0.37
PTP4A3O75365 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.39■□□□□ 0.37
PTP4A3O75365 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PTP4A3O75365 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PTP4A3O75365 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
PTP4A3O75365 TUBB8P6-201ENST00000436895 1288 ntBASIC17.39■□□□□ 0.37
PTP4A3O75365 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.39■□□□□ 0.37
PTP4A3O75365 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.39■□□□□ 0.37
PTP4A3O75365 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
PTP4A3O75365 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.39■□□□□ 0.37
PTP4A3O75365 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.39■□□□□ 0.37
PTP4A3O75365 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.39■□□□□ 0.37
PTP4A3O75365 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.39■□□□□ 0.37
PTP4A3O75365 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A3O75365 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.39■□□□□ 0.37
PTP4A3O75365 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A3O75365 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A3O75365 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.39■□□□□ 0.37
PTP4A3O75365 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.39■□□□□ 0.37
PTP4A3O75365 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PTP4A3O75365 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A3O75365 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A3O75365 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A3O75365 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A3O75365 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A3O75365 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PTP4A3O75365 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.39■□□□□ 0.37
PTP4A3O75365 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A3O75365 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
PTP4A3O75365 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A3O75365 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.38■□□□□ 0.37
PTP4A3O75365 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A3O75365 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PTP4A3O75365 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PTP4A3O75365 IRX1P1-201ENST00000438849 1838 ntBASIC17.38■□□□□ 0.37
PTP4A3O75365 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.38■□□□□ 0.37
PTP4A3O75365 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A3O75365 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
PTP4A3O75365 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
PTP4A3O75365 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
PTP4A3O75365 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A3O75365 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A3O75365 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A3O75365 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A3O75365 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.38■□□□□ 0.37
PTP4A3O75365 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.38■□□□□ 0.37
PTP4A3O75365 AC098934.4-201ENST00000564127 592 ntBASIC17.38■□□□□ 0.37
PTP4A3O75365 AC008687.6-201ENST00000596318 630 ntBASIC17.38■□□□□ 0.37
PTP4A3O75365 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.38■□□□□ 0.37
PTP4A3O75365 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
PTP4A3O75365 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
PTP4A3O75365 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A3O75365 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
PTP4A3O75365 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A3O75365 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
PTP4A3O75365 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
PTP4A3O75365 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.38■□□□□ 0.37
PTP4A3O75365 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.38■□□□□ 0.37
PTP4A3O75365 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A3O75365 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PTP4A3O75365 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A3O75365 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.37■□□□□ 0.37
PTP4A3O75365 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A3O75365 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A3O75365 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A3O75365 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A3O75365 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.37■□□□□ 0.37
PTP4A3O75365 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A3O75365 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A3O75365 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A3O75365 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A3O75365 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PTP4A3O75365 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PTP4A3O75365 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A3O75365 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PTP4A3O75365 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A3O75365 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A3O75365 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A3O75365 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A3O75365 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A3O75365 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A3O75365 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PTP4A3O75365 SOX15-203ENST00000570788 1093 ntBASIC17.37■□□□□ 0.37
PTP4A3O75365 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms