Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.31■□□□□ 0.52
SCN2BO60939 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.31■□□□□ 0.52
SCN2BO60939 YBX1P10-201ENST00000444752 975 ntBASIC18.31■□□□□ 0.52
SCN2BO60939 PNMA6B-201ENST00000538162 1200 ntBASIC18.31■□□□□ 0.52
SCN2BO60939 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.31■□□□□ 0.52
SCN2BO60939 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCN2BO60939 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.31■□□□□ 0.52
SCN2BO60939 AC083880.1-201ENST00000608266 535 ntBASIC18.31■□□□□ 0.52
SCN2BO60939 AC120498.8-201ENST00000614275 531 ntBASIC18.31■□□□□ 0.52
SCN2BO60939 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN2BO60939 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.31■□□□□ 0.52
SCN2BO60939 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
SCN2BO60939 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCN2BO60939 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SCN2BO60939 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
SCN2BO60939 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.31■□□□□ 0.52
SCN2BO60939 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN2BO60939 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCN2BO60939 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
SCN2BO60939 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SCN2BO60939 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN2BO60939 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN2BO60939 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCN2BO60939 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN2BO60939 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.3■□□□□ 0.52
SCN2BO60939 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN2BO60939 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN2BO60939 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.3■□□□□ 0.52
SCN2BO60939 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN2BO60939 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.3■□□□□ 0.52
SCN2BO60939 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCN2BO60939 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN2BO60939 AP006587.1-201ENST00000534129 1502 ntBASIC18.3■□□□□ 0.52
SCN2BO60939 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN2BO60939 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.3■□□□□ 0.52
SCN2BO60939 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN2BO60939 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SCN2BO60939 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCN2BO60939 AC098934.4-201ENST00000564127 592 ntBASIC18.3■□□□□ 0.52
SCN2BO60939 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.3■□□□□ 0.52
SCN2BO60939 AC060766.5-201ENST00000590539 871 ntBASIC18.3■□□□□ 0.52
SCN2BO60939 AL121906.2-201ENST00000621597 723 ntBASIC18.3■□□□□ 0.52
SCN2BO60939 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN2BO60939 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN2BO60939 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
SCN2BO60939 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN2BO60939 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN2BO60939 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN2BO60939 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN2BO60939 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN2BO60939 KRT8P8-201ENST00000434750 1448 ntBASIC18.3■□□□□ 0.52
SCN2BO60939 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN2BO60939 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN2BO60939 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCN2BO60939 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN2BO60939 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.3■□□□□ 0.52
SCN2BO60939 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.3■□□□□ 0.52
SCN2BO60939 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.3■□□□□ 0.52
SCN2BO60939 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SCN2BO60939 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCN2BO60939 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN2BO60939 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.29■□□□□ 0.52
SCN2BO60939 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCN2BO60939 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SCN2BO60939 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCN2BO60939 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN2BO60939 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN2BO60939 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.29■□□□□ 0.52
SCN2BO60939 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SCN2BO60939 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN2BO60939 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.29■□□□□ 0.52
SCN2BO60939 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN2BO60939 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.29■□□□□ 0.52
SCN2BO60939 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCN2BO60939 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.29■□□□□ 0.52
SCN2BO60939 AL138781.1-201ENST00000566567 1274 ntBASIC18.29■□□□□ 0.52
SCN2BO60939 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC18.29■□□□□ 0.52
SCN2BO60939 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN2BO60939 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCN2BO60939 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SCN2BO60939 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN2BO60939 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SCN2BO60939 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCN2BO60939 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCN2BO60939 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
SCN2BO60939 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN2BO60939 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCN2BO60939 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.28■□□□□ 0.52
SCN2BO60939 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCN2BO60939 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN2BO60939 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN2BO60939 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SCN2BO60939 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.28■□□□□ 0.52
SCN2BO60939 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN2BO60939 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN2BO60939 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN2BO60939 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN2BO60939 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SCN2BO60939 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SCN2BO60939 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms