Protein–RNA interactions for Protein: O60548

FOXD2, Forkhead box protein D2, humanhuman

Predicted RBP Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD2O60548 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
FOXD2O60548 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
FOXD2O60548 AC011484.1-201ENST00000377652 1995 ntBASIC19.41■□□□□ 0.7
FOXD2O60548 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
FOXD2O60548 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD2O60548 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD2O60548 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.41■□□□□ 0.7
FOXD2O60548 AL671277.2-201ENST00000458060 996 ntBASIC19.41■□□□□ 0.7
FOXD2O60548 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
FOXD2O60548 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD2O60548 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.41■□□□□ 0.7
FOXD2O60548 AC130371.2-201ENST00000619443 611 ntBASIC19.41■□□□□ 0.7
FOXD2O60548 AC116407.4-201ENST00000623319 1061 ntBASIC19.41■□□□□ 0.7
FOXD2O60548 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.41■□□□□ 0.7
FOXD2O60548 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD2O60548 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD2O60548 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD2O60548 KRT8P20-201ENST00000423953 1409 ntBASIC19.41■□□□□ 0.7
FOXD2O60548 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD2O60548 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
FOXD2O60548 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.41■□□□□ 0.7
FOXD2O60548 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
FOXD2O60548 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
FOXD2O60548 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD2O60548 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD2O60548 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD2O60548 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD2O60548 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD2O60548 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.4■□□□□ 0.7
FOXD2O60548 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD2O60548 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD2O60548 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.4■□□□□ 0.7
FOXD2O60548 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.4■□□□□ 0.7
FOXD2O60548 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD2O60548 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXD2O60548 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
FOXD2O60548 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD2O60548 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXD2O60548 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD2O60548 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
FOXD2O60548 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
FOXD2O60548 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.4■□□□□ 0.7
FOXD2O60548 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
FOXD2O60548 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
FOXD2O60548 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
FOXD2O60548 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD2O60548 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD2O60548 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.39■□□□□ 0.69
FOXD2O60548 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD2O60548 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD2O60548 TSPY17P-201ENST00000450329 467 ntBASIC19.39■□□□□ 0.69
FOXD2O60548 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.39■□□□□ 0.69
FOXD2O60548 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.39■□□□□ 0.69
FOXD2O60548 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
FOXD2O60548 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.39■□□□□ 0.69
FOXD2O60548 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.39■□□□□ 0.69
FOXD2O60548 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD2O60548 AC096733.2-201ENST00000609937 1394 ntBASIC19.39■□□□□ 0.69
FOXD2O60548 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD2O60548 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD2O60548 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD2O60548 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
FOXD2O60548 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD2O60548 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
FOXD2O60548 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
FOXD2O60548 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD2O60548 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD2O60548 INGX-201ENST00000359239 846 ntBASIC19.38■□□□□ 0.69
FOXD2O60548 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD2O60548 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD2O60548 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD2O60548 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD2O60548 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD2O60548 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD2O60548 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD2O60548 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD2O60548 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXD2O60548 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXD2O60548 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
FOXD2O60548 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.38■□□□□ 0.69
FOXD2O60548 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.38■□□□□ 0.69
FOXD2O60548 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.38■□□□□ 0.69
FOXD2O60548 AC140113.3-201ENST00000605663 199 ntBASIC19.38■□□□□ 0.69
FOXD2O60548 AC011558.1-201ENST00000623459 338 ntBASIC19.38■□□□□ 0.69
FOXD2O60548 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
FOXD2O60548 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.38■□□□□ 0.69
FOXD2O60548 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD2O60548 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
FOXD2O60548 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FOXD2O60548 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXD2O60548 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXD2O60548 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
FOXD2O60548 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXD2O60548 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXD2O60548 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXD2O60548 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXD2O60548 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXD2O60548 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXD2O60548 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FOXD2O60548 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms