Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
SLC28A2O43868 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC28A2O43868 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.59■□□□□ 0.57
SLC28A2O43868 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC28A2O43868 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.58■□□□□ 0.57
SLC28A2O43868 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC28A2O43868 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC28A2O43868 UNC93B2-201ENST00000285383 730 ntBASIC18.58■□□□□ 0.56
SLC28A2O43868 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SLC28A2O43868 MIR1238-201ENST00000408483 83 ntBASIC18.58■□□□□ 0.56
SLC28A2O43868 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC28A2O43868 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC28A2O43868 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC28A2O43868 NAPSB-206ENST00000562112 1266 ntBASIC18.58■□□□□ 0.56
SLC28A2O43868 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.58■□□□□ 0.56
SLC28A2O43868 AL031963.3-201ENST00000606441 850 ntBASIC18.58■□□□□ 0.56
SLC28A2O43868 AP000525.1-201ENST00000608286 694 ntBASIC18.58■□□□□ 0.56
SLC28A2O43868 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC28A2O43868 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC28A2O43868 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.58■□□□□ 0.56
SLC28A2O43868 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC28A2O43868 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
SLC28A2O43868 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC28A2O43868 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC28A2O43868 KRT16P6-202ENST00000425692 1426 ntBASIC18.57■□□□□ 0.56
SLC28A2O43868 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
SLC28A2O43868 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC28A2O43868 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC28A2O43868 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC28A2O43868 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC28A2O43868 HTR7P1-201ENST00000538670 1336 ntBASIC18.57■□□□□ 0.56
SLC28A2O43868 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC28A2O43868 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC28A2O43868 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC28A2O43868 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC28A2O43868 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC28A2O43868 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC28A2O43868 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SLC28A2O43868 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC28A2O43868 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC28A2O43868 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC28A2O43868 AC104076.2-201ENST00000448912 469 ntBASIC18.57■□□□□ 0.56
SLC28A2O43868 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC28A2O43868 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.57■□□□□ 0.56
SLC28A2O43868 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SLC28A2O43868 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
SLC28A2O43868 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC28A2O43868 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC28A2O43868 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SLC28A2O43868 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC28A2O43868 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC28A2O43868 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC28A2O43868 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC28A2O43868 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC28A2O43868 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC28A2O43868 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SLC28A2O43868 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC28A2O43868 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SLC28A2O43868 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC28A2O43868 KRT8P20-201ENST00000423953 1409 ntBASIC18.57■□□□□ 0.56
SLC28A2O43868 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC28A2O43868 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.56■□□□□ 0.56
SLC28A2O43868 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC28A2O43868 AC116562.4-201ENST00000641316 2276 ntBASIC18.56■□□□□ 0.56
SLC28A2O43868 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SLC28A2O43868 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SLC28A2O43868 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC28A2O43868 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC28A2O43868 AL353807.1-201ENST00000427475 662 ntBASIC18.56■□□□□ 0.56
SLC28A2O43868 KRT18P56-201ENST00000507275 550 ntBASIC18.56■□□□□ 0.56
SLC28A2O43868 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.56■□□□□ 0.56
SLC28A2O43868 WWOX-216ENST00000569818 525 ntBASIC18.56■□□□□ 0.56
SLC28A2O43868 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC28A2O43868 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
SLC28A2O43868 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC28A2O43868 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SLC28A2O43868 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC28A2O43868 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC28A2O43868 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC28A2O43868 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC28A2O43868 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC28A2O43868 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC28A2O43868 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC28A2O43868 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC28A2O43868 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC28A2O43868 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC28A2O43868 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.55■□□□□ 0.56
SLC28A2O43868 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SLC28A2O43868 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SLC28A2O43868 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.55■□□□□ 0.56
SLC28A2O43868 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.55■□□□□ 0.56
SLC28A2O43868 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.55■□□□□ 0.56
SLC28A2O43868 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms