Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ACTN4O43707 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ACTN4O43707 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ACTN4O43707 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ACTN4O43707 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.67■■□□□ 1.06
ACTN4O43707 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.67■■□□□ 1.06
ACTN4O43707 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.67■■□□□ 1.06
ACTN4O43707 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
ACTN4O43707 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ACTN4O43707 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ACTN4O43707 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
ACTN4O43707 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
ACTN4O43707 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
ACTN4O43707 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
ACTN4O43707 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.66■■□□□ 1.06
ACTN4O43707 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
ACTN4O43707 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ACTN4O43707 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ACTN4O43707 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ACTN4O43707 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ACTN4O43707 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.66■■□□□ 1.06
ACTN4O43707 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ACTN4O43707 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ACTN4O43707 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.66■■□□□ 1.06
ACTN4O43707 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.66■■□□□ 1.06
ACTN4O43707 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.66■■□□□ 1.06
ACTN4O43707 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ACTN4O43707 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC21.66■■□□□ 1.06
ACTN4O43707 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.66■■□□□ 1.06
ACTN4O43707 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC21.66■■□□□ 1.06
ACTN4O43707 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.66■■□□□ 1.06
ACTN4O43707 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
ACTN4O43707 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.66■■□□□ 1.06
ACTN4O43707 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.66■■□□□ 1.06
ACTN4O43707 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
ACTN4O43707 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
ACTN4O43707 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ACTN4O43707 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
ACTN4O43707 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ACTN4O43707 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ACTN4O43707 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ACTN4O43707 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
ACTN4O43707 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ACTN4O43707 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
ACTN4O43707 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
ACTN4O43707 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21.65■■□□□ 1.06
ACTN4O43707 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ACTN4O43707 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.65■■□□□ 1.06
ACTN4O43707 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.65■■□□□ 1.06
ACTN4O43707 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.65■■□□□ 1.06
ACTN4O43707 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.65■■□□□ 1.06
ACTN4O43707 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ACTN4O43707 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ACTN4O43707 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
ACTN4O43707 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.65■■□□□ 1.06
ACTN4O43707 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.65■■□□□ 1.06
ACTN4O43707 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
ACTN4O43707 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.65■■□□□ 1.06
ACTN4O43707 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ACTN4O43707 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
ACTN4O43707 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.64■■□□□ 1.06
ACTN4O43707 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
ACTN4O43707 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
ACTN4O43707 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ACTN4O43707 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
ACTN4O43707 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
ACTN4O43707 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
ACTN4O43707 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.64■■□□□ 1.05
ACTN4O43707 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.64■■□□□ 1.05
ACTN4O43707 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ACTN4O43707 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ACTN4O43707 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ACTN4O43707 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.64■■□□□ 1.05
ACTN4O43707 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.64■■□□□ 1.05
ACTN4O43707 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC21.64■■□□□ 1.05
ACTN4O43707 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC21.64■■□□□ 1.05
ACTN4O43707 F2R-202ENST00000505600 442 ntTSL 2 BASIC21.64■■□□□ 1.05
ACTN4O43707 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.64■■□□□ 1.05
ACTN4O43707 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.64■■□□□ 1.05
ACTN4O43707 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC21.64■■□□□ 1.05
ACTN4O43707 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ACTN4O43707 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.64■■□□□ 1.05
ACTN4O43707 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
ACTN4O43707 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ACTN4O43707 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.64■■□□□ 1.05
ACTN4O43707 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
ACTN4O43707 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
ACTN4O43707 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
ACTN4O43707 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
ACTN4O43707 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
ACTN4O43707 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
ACTN4O43707 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ACTN4O43707 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ACTN4O43707 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
ACTN4O43707 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
ACTN4O43707 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ACTN4O43707 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ACTN4O43707 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
ACTN4O43707 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
ACTN4O43707 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms