Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXS1O43638 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXS1O43638 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
FOXS1O43638 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
FOXS1O43638 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXS1O43638 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXS1O43638 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXS1O43638 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.21■□□□□ 0.51
FOXS1O43638 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
FOXS1O43638 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
FOXS1O43638 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
FOXS1O43638 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
FOXS1O43638 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXS1O43638 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.2■□□□□ 0.5
FOXS1O43638 Z82202.1-201ENST00000623446 1880 ntBASIC18.2■□□□□ 0.5
FOXS1O43638 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXS1O43638 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXS1O43638 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
FOXS1O43638 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
FOXS1O43638 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXS1O43638 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXS1O43638 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXS1O43638 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
FOXS1O43638 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXS1O43638 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXS1O43638 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.2■□□□□ 0.5
FOXS1O43638 AC211429.1-201ENST00000415277 523 ntBASIC18.2■□□□□ 0.5
FOXS1O43638 AP005242.2-201ENST00000580065 1175 ntBASIC18.2■□□□□ 0.5
FOXS1O43638 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.2■□□□□ 0.5
FOXS1O43638 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.2■□□□□ 0.5
FOXS1O43638 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
FOXS1O43638 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
FOXS1O43638 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXS1O43638 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXS1O43638 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FOXS1O43638 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXS1O43638 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXS1O43638 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXS1O43638 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FOXS1O43638 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXS1O43638 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXS1O43638 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXS1O43638 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXS1O43638 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
FOXS1O43638 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
FOXS1O43638 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXS1O43638 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXS1O43638 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
FOXS1O43638 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXS1O43638 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXS1O43638 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FOXS1O43638 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
FOXS1O43638 CRYGFP-201ENST00000418459 633 ntBASIC18.19■□□□□ 0.5
FOXS1O43638 SLC25A1P4-201ENST00000567977 778 ntBASIC18.19■□□□□ 0.5
FOXS1O43638 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXS1O43638 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
FOXS1O43638 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXS1O43638 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXS1O43638 CYP2D8P-201ENST00000433633 1490 ntBASIC18.19■□□□□ 0.5
FOXS1O43638 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.19■□□□□ 0.5
FOXS1O43638 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.19■□□□□ 0.5
FOXS1O43638 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.19■□□□□ 0.5
FOXS1O43638 AC096733.2-201ENST00000609937 1394 ntBASIC18.18■□□□□ 0.5
FOXS1O43638 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXS1O43638 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXS1O43638 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXS1O43638 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
FOXS1O43638 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXS1O43638 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
FOXS1O43638 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXS1O43638 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.18■□□□□ 0.5
FOXS1O43638 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXS1O43638 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.18■□□□□ 0.5
FOXS1O43638 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.18■□□□□ 0.5
FOXS1O43638 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
FOXS1O43638 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXS1O43638 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FOXS1O43638 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXS1O43638 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
FOXS1O43638 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXS1O43638 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXS1O43638 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
FOXS1O43638 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.18■□□□□ 0.5
FOXS1O43638 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXS1O43638 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXS1O43638 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXS1O43638 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.17■□□□□ 0.5
FOXS1O43638 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXS1O43638 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXS1O43638 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FOXS1O43638 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
FOXS1O43638 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FOXS1O43638 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.17■□□□□ 0.5
FOXS1O43638 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.17■□□□□ 0.5
FOXS1O43638 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.17■□□□□ 0.5
FOXS1O43638 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.17■□□□□ 0.5
FOXS1O43638 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
FOXS1O43638 AC012306.2-201ENST00000609350 630 ntBASIC18.17■□□□□ 0.5
FOXS1O43638 AC133561.5-201ENST00000635547 218 ntBASIC18.17■□□□□ 0.5
FOXS1O43638 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms