Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
PHGDHO43175 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.2■□□□□ 0.66
PHGDHO43175 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PHGDHO43175 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.2■□□□□ 0.66
PHGDHO43175 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHGDHO43175 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHGDHO43175 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
PHGDHO43175 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
PHGDHO43175 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PHGDHO43175 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PHGDHO43175 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
PHGDHO43175 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.2■□□□□ 0.66
PHGDHO43175 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PHGDHO43175 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PHGDHO43175 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.19■□□□□ 0.66
PHGDHO43175 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.19■□□□□ 0.66
PHGDHO43175 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHGDHO43175 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PHGDHO43175 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHGDHO43175 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.19■□□□□ 0.66
PHGDHO43175 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.19■□□□□ 0.66
PHGDHO43175 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.19■□□□□ 0.66
PHGDHO43175 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHGDHO43175 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PHGDHO43175 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHGDHO43175 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHGDHO43175 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHGDHO43175 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
PHGDHO43175 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PHGDHO43175 YBX1P10-201ENST00000444752 975 ntBASIC19.19■□□□□ 0.66
PHGDHO43175 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.19■□□□□ 0.66
PHGDHO43175 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.19■□□□□ 0.66
PHGDHO43175 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
PHGDHO43175 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHGDHO43175 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.19■□□□□ 0.66
PHGDHO43175 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHGDHO43175 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHGDHO43175 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHGDHO43175 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PHGDHO43175 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.19■□□□□ 0.66
PHGDHO43175 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHGDHO43175 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PHGDHO43175 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHGDHO43175 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.18■□□□□ 0.66
PHGDHO43175 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.18■□□□□ 0.66
PHGDHO43175 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PHGDHO43175 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHGDHO43175 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.18■□□□□ 0.66
PHGDHO43175 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHGDHO43175 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHGDHO43175 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.18■□□□□ 0.66
PHGDHO43175 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
PHGDHO43175 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.18■□□□□ 0.66
PHGDHO43175 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.18■□□□□ 0.66
PHGDHO43175 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.18■□□□□ 0.66
PHGDHO43175 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHGDHO43175 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHGDHO43175 SOX15-203ENST00000570788 1093 ntBASIC19.18■□□□□ 0.66
PHGDHO43175 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.18■□□□□ 0.66
PHGDHO43175 AC120498.8-201ENST00000614275 531 ntBASIC19.18■□□□□ 0.66
PHGDHO43175 AL109923.1-201ENST00000618799 583 ntBASIC19.18■□□□□ 0.66
PHGDHO43175 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHGDHO43175 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.18■□□□□ 0.66
PHGDHO43175 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHGDHO43175 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PHGDHO43175 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PHGDHO43175 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHGDHO43175 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PHGDHO43175 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
PHGDHO43175 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.18■□□□□ 0.66
PHGDHO43175 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PHGDHO43175 CROCCP3-202ENST00000420820 1947 ntBASIC19.17■□□□□ 0.66
PHGDHO43175 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHGDHO43175 KRT8P8-201ENST00000434750 1448 ntBASIC19.17■□□□□ 0.66
PHGDHO43175 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.17■□□□□ 0.66
PHGDHO43175 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHGDHO43175 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHGDHO43175 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.17■□□□□ 0.66
PHGDHO43175 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHGDHO43175 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHGDHO43175 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.17■□□□□ 0.66
PHGDHO43175 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.17■□□□□ 0.66
PHGDHO43175 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PHGDHO43175 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.17■□□□□ 0.66
PHGDHO43175 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.17■□□□□ 0.66
PHGDHO43175 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
PHGDHO43175 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.17■□□□□ 0.66
PHGDHO43175 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHGDHO43175 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHGDHO43175 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.17■□□□□ 0.66
PHGDHO43175 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHGDHO43175 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PHGDHO43175 AC006333.2-201ENST00000607957 2099 ntBASIC19.16■□□□□ 0.66
PHGDHO43175 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHGDHO43175 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHGDHO43175 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PHGDHO43175 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PHGDHO43175 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PHGDHO43175 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PHGDHO43175 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms