Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.16■□□□□ 0.5
RRP8O43159 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RRP8O43159 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RRP8O43159 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RRP8O43159 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RRP8O43159 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RRP8O43159 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RRP8O43159 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.15■□□□□ 0.5
RRP8O43159 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RRP8O43159 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RRP8O43159 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RRP8O43159 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
RRP8O43159 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.15■□□□□ 0.5
RRP8O43159 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RRP8O43159 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
RRP8O43159 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.15■□□□□ 0.5
RRP8O43159 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.15■□□□□ 0.5
RRP8O43159 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RRP8O43159 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.15■□□□□ 0.5
RRP8O43159 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RRP8O43159 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RRP8O43159 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
RRP8O43159 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RRP8O43159 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RRP8O43159 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RRP8O43159 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.15■□□□□ 0.5
RRP8O43159 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RRP8O43159 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.14■□□□□ 0.49
RRP8O43159 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RRP8O43159 PHGDH-210ENST00000641115 1638 ntBASIC18.14■□□□□ 0.49
RRP8O43159 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.14■□□□□ 0.49
RRP8O43159 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.14■□□□□ 0.49
RRP8O43159 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.14■□□□□ 0.49
RRP8O43159 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.14■□□□□ 0.49
RRP8O43159 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RRP8O43159 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.14■□□□□ 0.49
RRP8O43159 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RRP8O43159 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RRP8O43159 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RRP8O43159 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.14■□□□□ 0.49
RRP8O43159 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RRP8O43159 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RRP8O43159 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RRP8O43159 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RRP8O43159 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.13■□□□□ 0.49
RRP8O43159 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.13■□□□□ 0.49
RRP8O43159 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RRP8O43159 Z98882.1-201ENST00000622160 2253 ntBASIC18.13■□□□□ 0.49
RRP8O43159 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RRP8O43159 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RRP8O43159 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
RRP8O43159 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.13■□□□□ 0.49
RRP8O43159 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.13■□□□□ 0.49
RRP8O43159 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.13■□□□□ 0.49
RRP8O43159 AL160286.2-201ENST00000567150 934 ntBASIC18.13■□□□□ 0.49
RRP8O43159 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RRP8O43159 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RRP8O43159 HYMAI.1-201ENST00000620949 238 ntBASIC18.13■□□□□ 0.49
RRP8O43159 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RRP8O43159 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RRP8O43159 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
RRP8O43159 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.13■□□□□ 0.49
RRP8O43159 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.13■□□□□ 0.49
RRP8O43159 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.13■□□□□ 0.49
RRP8O43159 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.13■□□□□ 0.49
RRP8O43159 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RRP8O43159 SLC25A24-204ENST00000569674 2357 ntBASIC18.12■□□□□ 0.49
RRP8O43159 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.12■□□□□ 0.49
RRP8O43159 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RRP8O43159 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RRP8O43159 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RRP8O43159 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RRP8O43159 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.12■□□□□ 0.49
RRP8O43159 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RRP8O43159 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RRP8O43159 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.12■□□□□ 0.49
RRP8O43159 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.12■□□□□ 0.49
RRP8O43159 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.12■□□□□ 0.49
RRP8O43159 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.12■□□□□ 0.49
RRP8O43159 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RRP8O43159 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.12■□□□□ 0.49
RRP8O43159 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.12■□□□□ 0.49
RRP8O43159 GCSHP2-201ENST00000560971 527 ntBASIC18.12■□□□□ 0.49
RRP8O43159 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RRP8O43159 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RRP8O43159 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RRP8O43159 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RRP8O43159 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RRP8O43159 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.11■□□□□ 0.49
RRP8O43159 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
RRP8O43159 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RRP8O43159 AL645929.1-201ENST00000420084 975 ntBASIC18.11■□□□□ 0.49
RRP8O43159 BX276092.5-203ENST00000456199 560 ntBASIC18.11■□□□□ 0.49
RRP8O43159 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.11■□□□□ 0.49
RRP8O43159 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.11■□□□□ 0.49
RRP8O43159 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
RRP8O43159 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.11■□□□□ 0.49
RRP8O43159 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
RRP8O43159 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RRP8O43159 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms