Protein–RNA interactions for Protein: O15078

CEP290, Centrosomal protein of 290 kDa, humanhuman

Predictions only

Length 2,479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290O15078 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CEP290O15078 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.98■□□□□ 0.95
CEP290O15078 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
CEP290O15078 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CEP290O15078 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CEP290O15078 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CEP290O15078 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CEP290O15078 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CEP290O15078 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CEP290O15078 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.97■□□□□ 0.95
CEP290O15078 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CEP290O15078 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CEP290O15078 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CEP290O15078 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CEP290O15078 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CEP290O15078 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CEP290O15078 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CEP290O15078 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CEP290O15078 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.97■□□□□ 0.95
CEP290O15078 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CEP290O15078 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CEP290O15078 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CEP290O15078 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC20.97■□□□□ 0.95
CEP290O15078 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.97■□□□□ 0.95
CEP290O15078 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CEP290O15078 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CEP290O15078 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CEP290O15078 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
CEP290O15078 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CEP290O15078 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CEP290O15078 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CEP290O15078 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CEP290O15078 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CEP290O15078 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CEP290O15078 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.96■□□□□ 0.95
CEP290O15078 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.96■□□□□ 0.95
CEP290O15078 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.96■□□□□ 0.95
CEP290O15078 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC20.96■□□□□ 0.95
CEP290O15078 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CEP290O15078 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CEP290O15078 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CEP290O15078 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CEP290O15078 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.96■□□□□ 0.95
CEP290O15078 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.96■□□□□ 0.95
CEP290O15078 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CEP290O15078 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CEP290O15078 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.96■□□□□ 0.95
CEP290O15078 RPL13AP23-201ENST00000480739 586 ntBASIC20.96■□□□□ 0.95
CEP290O15078 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.96■□□□□ 0.95
CEP290O15078 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CEP290O15078 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.96■□□□□ 0.95
CEP290O15078 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CEP290O15078 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.95■□□□□ 0.94
CEP290O15078 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.95■□□□□ 0.94
CEP290O15078 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CEP290O15078 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CEP290O15078 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CEP290O15078 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CEP290O15078 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CEP290O15078 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CEP290O15078 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.95■□□□□ 0.94
CEP290O15078 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.95■□□□□ 0.94
CEP290O15078 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.95■□□□□ 0.94
CEP290O15078 AC004967.1-201ENST00000453589 447 ntBASIC20.95■□□□□ 0.94
CEP290O15078 SEC1P-202ENST00000473944 940 ntBASIC20.95■□□□□ 0.94
CEP290O15078 AC139887.3-201ENST00000568585 713 ntBASIC20.95■□□□□ 0.94
CEP290O15078 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC20.95■□□□□ 0.94
CEP290O15078 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.95■□□□□ 0.94
CEP290O15078 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CEP290O15078 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CEP290O15078 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.94■□□□□ 0.94
CEP290O15078 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.94■□□□□ 0.94
CEP290O15078 AF186996.4-201ENST00000467186 377 ntBASIC20.94■□□□□ 0.94
CEP290O15078 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.94■□□□□ 0.94
CEP290O15078 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.94■□□□□ 0.94
CEP290O15078 AC009065.1-201ENST00000564055 1225 ntBASIC20.94■□□□□ 0.94
CEP290O15078 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.94■□□□□ 0.94
CEP290O15078 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CEP290O15078 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.94■□□□□ 0.94
CEP290O15078 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.94■□□□□ 0.94
CEP290O15078 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CEP290O15078 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CEP290O15078 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CEP290O15078 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CEP290O15078 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CEP290O15078 AC233702.3-201ENST00000578656 1387 ntBASIC20.93■□□□□ 0.94
CEP290O15078 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CEP290O15078 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.93■□□□□ 0.94
CEP290O15078 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.93■□□□□ 0.94
CEP290O15078 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.93■□□□□ 0.94
CEP290O15078 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CEP290O15078 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CEP290O15078 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC20.93■□□□□ 0.94
CEP290O15078 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CEP290O15078 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
CEP290O15078 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CEP290O15078 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.93■□□□□ 0.94
CEP290O15078 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.92■□□□□ 0.94
CEP290O15078 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CEP290O15078 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms