Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC31.38■■■□□ 2.61
CHD1O14646 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CHD1O14646 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC31.38■■■□□ 2.61
CHD1O14646 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
CHD1O14646 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC31.38■■■□□ 2.61
CHD1O14646 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC31.38■■■□□ 2.61
CHD1O14646 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CHD1O14646 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC31.38■■■□□ 2.61
CHD1O14646 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC31.38■■■□□ 2.61
CHD1O14646 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
CHD1O14646 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CHD1O14646 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
CHD1O14646 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC31.37■■■□□ 2.61
CHD1O14646 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
CHD1O14646 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
CHD1O14646 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
CHD1O14646 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC31.37■■■□□ 2.61
CHD1O14646 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CHD1O14646 GAD2-202ENST00000376248 680 ntTSL 5 BASIC31.37■■■□□ 2.61
CHD1O14646 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC31.37■■■□□ 2.61
CHD1O14646 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC31.37■■■□□ 2.61
CHD1O14646 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC31.37■■■□□ 2.61
CHD1O14646 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC31.37■■■□□ 2.61
CHD1O14646 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC31.37■■■□□ 2.61
CHD1O14646 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
CHD1O14646 AL391807.1-203ENST00000604392 2365 ntBASIC31.37■■■□□ 2.61
CHD1O14646 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC31.37■■■□□ 2.61
CHD1O14646 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC31.37■■■□□ 2.61
CHD1O14646 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
CHD1O14646 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
CHD1O14646 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CHD1O14646 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
CHD1O14646 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CHD1O14646 MIR662-201ENST00000384847 95 ntBASIC31.36■■■□□ 2.61
CHD1O14646 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC31.36■■■□□ 2.61
CHD1O14646 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
CHD1O14646 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC31.36■■■□□ 2.61
CHD1O14646 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC31.36■■■□□ 2.61
CHD1O14646 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC31.36■■■□□ 2.61
CHD1O14646 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
CHD1O14646 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC31.36■■■□□ 2.61
CHD1O14646 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
CHD1O14646 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
CHD1O14646 TERT-206ENST00000508104 2486 ntTSL 5 BASIC31.36■■■□□ 2.61
CHD1O14646 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC31.35■■■□□ 2.61
CHD1O14646 NAA38-203ENST00000575071 553 ntTSL 2 BASIC31.35■■■□□ 2.61
CHD1O14646 TK1-205ENST00000590862 642 ntTSL 3 BASIC31.35■■■□□ 2.61
CHD1O14646 LINC01711-201ENST00000598340 967 ntBASIC31.35■■■□□ 2.61
CHD1O14646 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHD1O14646 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC31.35■■■□□ 2.61
CHD1O14646 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC31.35■■■□□ 2.61
CHD1O14646 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHD1O14646 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CHD1O14646 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
CHD1O14646 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
CHD1O14646 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC31.35■■■□□ 2.61
CHD1O14646 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC31.35■■■□□ 2.61
CHD1O14646 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC31.35■■■□□ 2.61
CHD1O14646 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CHD1O14646 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC31.34■■■□□ 2.61
CHD1O14646 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
CHD1O14646 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC31.34■■■□□ 2.61
CHD1O14646 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CHD1O14646 AL139424.1-201ENST00000607572 797 ntBASIC31.34■■■□□ 2.61
CHD1O14646 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CHD1O14646 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CHD1O14646 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CHD1O14646 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CHD1O14646 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
CHD1O14646 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CHD1O14646 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC31.33■■■□□ 2.61
CHD1O14646 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC31.33■■■□□ 2.61
CHD1O14646 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC31.33■■■□□ 2.61
CHD1O14646 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC31.33■■■□□ 2.61
CHD1O14646 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC31.33■■■□□ 2.61
CHD1O14646 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CHD1O14646 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC31.32■■■□□ 2.61
CHD1O14646 AC106730.1-201ENST00000566722 1090 ntBASIC31.32■■■□□ 2.61
CHD1O14646 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CHD1O14646 GPAT2P1-201ENST00000444924 1672 ntBASIC31.32■■■□□ 2.6
CHD1O14646 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CHD1O14646 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC31.32■■■□□ 2.6
CHD1O14646 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC31.32■■■□□ 2.6
CHD1O14646 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CHD1O14646 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC31.32■■■□□ 2.6
CHD1O14646 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC31.32■■■□□ 2.6
CHD1O14646 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CHD1O14646 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
CHD1O14646 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CHD1O14646 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC31.31■■■□□ 2.6
CHD1O14646 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CHD1O14646 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CHD1O14646 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC31.31■■■□□ 2.6
CHD1O14646 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC31.31■■■□□ 2.6
CHD1O14646 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC31.31■■■□□ 2.6
CHD1O14646 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC31.31■■■□□ 2.6
CHD1O14646 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CHD1O14646 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC31.31■■■□□ 2.6
CHD1O14646 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CHD1O14646 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms