Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
DFFAO00273 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.86■□□□□ 0.77
DFFAO00273 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
DFFAO00273 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DFFAO00273 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.86■□□□□ 0.77
DFFAO00273 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DFFAO00273 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
DFFAO00273 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DFFAO00273 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
DFFAO00273 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DFFAO00273 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DFFAO00273 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
DFFAO00273 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.86■□□□□ 0.77
DFFAO00273 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DFFAO00273 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DFFAO00273 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DFFAO00273 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
DFFAO00273 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DFFAO00273 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.86■□□□□ 0.77
DFFAO00273 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
DFFAO00273 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
DFFAO00273 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.86■□□□□ 0.77
DFFAO00273 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DFFAO00273 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DFFAO00273 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.85■□□□□ 0.77
DFFAO00273 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DFFAO00273 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.85■□□□□ 0.77
DFFAO00273 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.85■□□□□ 0.77
DFFAO00273 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
DFFAO00273 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DFFAO00273 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
DFFAO00273 UBE2SP1-201ENST00000450587 669 ntBASIC19.85■□□□□ 0.77
DFFAO00273 AP002982.1-201ENST00000492365 877 ntBASIC19.85■□□□□ 0.77
DFFAO00273 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.85■□□□□ 0.77
DFFAO00273 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.85■□□□□ 0.77
DFFAO00273 HLA-A-209ENST00000638375 975 ntBASIC19.85■□□□□ 0.77
DFFAO00273 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.85■□□□□ 0.77
DFFAO00273 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
DFFAO00273 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DFFAO00273 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DFFAO00273 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DFFAO00273 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.85■□□□□ 0.77
DFFAO00273 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
DFFAO00273 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.85■□□□□ 0.77
DFFAO00273 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DFFAO00273 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.84■□□□□ 0.77
DFFAO00273 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DFFAO00273 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DFFAO00273 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DFFAO00273 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DFFAO00273 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.84■□□□□ 0.77
DFFAO00273 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.84■□□□□ 0.77
DFFAO00273 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
DFFAO00273 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.84■□□□□ 0.77
DFFAO00273 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.84■□□□□ 0.77
DFFAO00273 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.84■□□□□ 0.77
DFFAO00273 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DFFAO00273 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.84■□□□□ 0.77
DFFAO00273 AC104417.2-201ENST00000562989 1793 ntBASIC19.84■□□□□ 0.77
DFFAO00273 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.84■□□□□ 0.77
DFFAO00273 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DFFAO00273 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DFFAO00273 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DFFAO00273 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
DFFAO00273 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
DFFAO00273 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DFFAO00273 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.83■□□□□ 0.77
DFFAO00273 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DFFAO00273 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
DFFAO00273 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.83■□□□□ 0.77
DFFAO00273 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.83■□□□□ 0.77
DFFAO00273 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DFFAO00273 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
DFFAO00273 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DFFAO00273 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DFFAO00273 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.83■□□□□ 0.77
DFFAO00273 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.83■□□□□ 0.77
DFFAO00273 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
DFFAO00273 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.83■□□□□ 0.77
DFFAO00273 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.83■□□□□ 0.77
DFFAO00273 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
DFFAO00273 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.83■□□□□ 0.76
DFFAO00273 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
DFFAO00273 SDHAP1-207ENST00000440850 2000 ntBASIC19.83■□□□□ 0.76
DFFAO00273 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
DFFAO00273 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
DFFAO00273 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.83■□□□□ 0.76
DFFAO00273 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC19.83■□□□□ 0.76
DFFAO00273 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DFFAO00273 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
DFFAO00273 AC120498.9-201ENST00000339021 3867 ntBASIC19.82■□□□□ 0.76
DFFAO00273 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.82■□□□□ 0.76
DFFAO00273 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DFFAO00273 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.82■□□□□ 0.76
DFFAO00273 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
DFFAO00273 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.82■□□□□ 0.76
DFFAO00273 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DFFAO00273 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
DFFAO00273 AC005332.7-201ENST00000614046 2005 ntBASIC19.82■□□□□ 0.76
DFFAO00273 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms