Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3B1O00203 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3B1O00203 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3B1O00203 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3B1O00203 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.5■□□□□ 0.71
AP3B1O00203 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
AP3B1O00203 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3B1O00203 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.5■□□□□ 0.71
AP3B1O00203 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3B1O00203 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
AP3B1O00203 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.5■□□□□ 0.71
AP3B1O00203 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.5■□□□□ 0.71
AP3B1O00203 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.5■□□□□ 0.71
AP3B1O00203 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
AP3B1O00203 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
AP3B1O00203 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
AP3B1O00203 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3B1O00203 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.5■□□□□ 0.71
AP3B1O00203 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
AP3B1O00203 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.5■□□□□ 0.71
AP3B1O00203 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
AP3B1O00203 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3B1O00203 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
AP3B1O00203 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.5■□□□□ 0.71
AP3B1O00203 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3B1O00203 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
AP3B1O00203 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
AP3B1O00203 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AP3B1O00203 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.49■□□□□ 0.71
AP3B1O00203 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
AP3B1O00203 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.49■□□□□ 0.71
AP3B1O00203 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.49■□□□□ 0.71
AP3B1O00203 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP3B1O00203 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP3B1O00203 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP3B1O00203 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP3B1O00203 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.49■□□□□ 0.71
AP3B1O00203 HLA-L-209ENST00000420110 1011 ntBASIC19.49■□□□□ 0.71
AP3B1O00203 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
AP3B1O00203 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.49■□□□□ 0.71
AP3B1O00203 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
AP3B1O00203 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
AP3B1O00203 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
AP3B1O00203 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP3B1O00203 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.49■□□□□ 0.71
AP3B1O00203 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
AP3B1O00203 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP3B1O00203 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
AP3B1O00203 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.49■□□□□ 0.71
AP3B1O00203 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.49■□□□□ 0.71
AP3B1O00203 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.49■□□□□ 0.71
AP3B1O00203 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
AP3B1O00203 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
AP3B1O00203 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
AP3B1O00203 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
AP3B1O00203 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
AP3B1O00203 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.48■□□□□ 0.71
AP3B1O00203 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
AP3B1O00203 NBPF21P-201ENST00000425093 1451 ntBASIC19.48■□□□□ 0.71
AP3B1O00203 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.48■□□□□ 0.71
AP3B1O00203 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
AP3B1O00203 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.48■□□□□ 0.71
AP3B1O00203 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
AP3B1O00203 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP3B1O00203 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.48■□□□□ 0.71
AP3B1O00203 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.48■□□□□ 0.71
AP3B1O00203 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP3B1O00203 ID1-201ENST00000376105 1233 ntBASIC19.48■□□□□ 0.71
AP3B1O00203 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.48■□□□□ 0.71
AP3B1O00203 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.48■□□□□ 0.71
AP3B1O00203 AP003097.1-201ENST00000530657 1135 ntBASIC19.48■□□□□ 0.71
AP3B1O00203 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.48■□□□□ 0.71
AP3B1O00203 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.48■□□□□ 0.71
AP3B1O00203 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.48■□□□□ 0.71
AP3B1O00203 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.48■□□□□ 0.71
AP3B1O00203 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP3B1O00203 AL161938.1-201ENST00000569833 2180 ntBASIC19.48■□□□□ 0.71
AP3B1O00203 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
AP3B1O00203 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
AP3B1O00203 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
AP3B1O00203 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP3B1O00203 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP3B1O00203 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
AP3B1O00203 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP3B1O00203 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP3B1O00203 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
AP3B1O00203 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
AP3B1O00203 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
AP3B1O00203 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
AP3B1O00203 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.48■□□□□ 0.71
AP3B1O00203 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.48■□□□□ 0.71
AP3B1O00203 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3B1O00203 SDHAP1-207ENST00000440850 2000 ntBASIC19.47■□□□□ 0.71
AP3B1O00203 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.47■□□□□ 0.71
AP3B1O00203 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3B1O00203 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
AP3B1O00203 AC120498.9-201ENST00000339021 3867 ntBASIC19.47■□□□□ 0.71
AP3B1O00203 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.47■□□□□ 0.71
AP3B1O00203 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.47■□□□□ 0.71
AP3B1O00203 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms