Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM1O00151 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM1O00151 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM1O00151 AC091799.1-201ENST00000422823 811 ntBASIC18.35■□□□□ 0.53
PDLIM1O00151 CROCCP5-201ENST00000436658 830 ntBASIC18.35■□□□□ 0.53
PDLIM1O00151 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PDLIM1O00151 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.35■□□□□ 0.53
PDLIM1O00151 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.35■□□□□ 0.53
PDLIM1O00151 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.35■□□□□ 0.53
PDLIM1O00151 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
PDLIM1O00151 FAM21FP-204ENST00000608637 956 ntBASIC18.35■□□□□ 0.53
PDLIM1O00151 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.35■□□□□ 0.53
PDLIM1O00151 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PDLIM1O00151 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.35■□□□□ 0.53
PDLIM1O00151 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC18.35■□□□□ 0.53
PDLIM1O00151 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM1O00151 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM1O00151 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM1O00151 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM1O00151 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.35■□□□□ 0.53
PDLIM1O00151 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM1O00151 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.35■□□□□ 0.53
PDLIM1O00151 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDLIM1O00151 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM1O00151 AL391005.1-201ENST00000623953 2435 ntBASIC18.34■□□□□ 0.53
PDLIM1O00151 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM1O00151 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM1O00151 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM1O00151 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM1O00151 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.34■□□□□ 0.53
PDLIM1O00151 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM1O00151 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM1O00151 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM1O00151 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM1O00151 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM1O00151 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PDLIM1O00151 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.34■□□□□ 0.53
PDLIM1O00151 AC007322.1-201ENST00000426983 750 ntBASIC18.34■□□□□ 0.53
PDLIM1O00151 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.34■□□□□ 0.53
PDLIM1O00151 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM1O00151 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.34■□□□□ 0.53
PDLIM1O00151 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM1O00151 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.34■□□□□ 0.53
PDLIM1O00151 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM1O00151 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM1O00151 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.34■□□□□ 0.53
PDLIM1O00151 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.34■□□□□ 0.53
PDLIM1O00151 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM1O00151 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PDLIM1O00151 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM1O00151 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM1O00151 AL161938.1-201ENST00000569833 2180 ntBASIC18.34■□□□□ 0.53
PDLIM1O00151 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PDLIM1O00151 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDLIM1O00151 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PDLIM1O00151 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDLIM1O00151 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.33■□□□□ 0.53
PDLIM1O00151 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDLIM1O00151 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PDLIM1O00151 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PDLIM1O00151 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDLIM1O00151 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PDLIM1O00151 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.33■□□□□ 0.53
PDLIM1O00151 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDLIM1O00151 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.33■□□□□ 0.53
PDLIM1O00151 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.33■□□□□ 0.53
PDLIM1O00151 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.33■□□□□ 0.53
PDLIM1O00151 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDLIM1O00151 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.33■□□□□ 0.53
PDLIM1O00151 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM1O00151 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM1O00151 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM1O00151 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PDLIM1O00151 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM1O00151 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.33■□□□□ 0.52
PDLIM1O00151 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.33■□□□□ 0.52
PDLIM1O00151 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM1O00151 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.33■□□□□ 0.52
PDLIM1O00151 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PDLIM1O00151 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM1O00151 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM1O00151 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.33■□□□□ 0.52
PDLIM1O00151 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM1O00151 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.33■□□□□ 0.52
PDLIM1O00151 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PDLIM1O00151 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM1O00151 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM1O00151 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDLIM1O00151 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.32■□□□□ 0.52
PDLIM1O00151 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM1O00151 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.32■□□□□ 0.52
PDLIM1O00151 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.32■□□□□ 0.52
PDLIM1O00151 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.32■□□□□ 0.52
PDLIM1O00151 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM1O00151 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM1O00151 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM1O00151 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PDLIM1O00151 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM1O00151 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDLIM1O00151 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms