Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.36■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 KRT18P57-201ENST00000443599 1254 ntBASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 PRSS44-201ENST00000515154 1146 ntBASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 CKBP1-201ENST00000565489 1086 ntBASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 AC112907.3-201ENST00000577781 2400 ntBASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 ZNF815P-204ENST00000434898 1737 ntBASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 HMGA1P5-201ENST00000412453 271 ntBASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 CA15P1-201ENST00000481698 905 ntBASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.33■□□□□ 0.69
C1QTNF3-AMACRE9PGA6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.33■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 TSPY17P-201ENST00000450329 467 ntBASIC19.33■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.33■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AC010653.2-201ENST00000623505 997 ntBASIC19.33■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AC104417.2-201ENST00000562989 1793 ntBASIC19.33■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.33■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.32■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.32■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.32■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 FAM87A-204ENST00000613235 858 ntBASIC19.32■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.32■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.32■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AC073508.3-201ENST00000619697 1419 ntBASIC19.32■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.32■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.32■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.32■□□□□ 0.68
C1QTNF3-AMACRE9PGA6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms