Protein–RNA interactions for Protein: A6NEW6

FAM90A16P, Putative protein FAM90A16P/FAM90A17P, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A16PA6NEW6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
FAM90A16PA6NEW6 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 AC120498.9-201ENST00000339021 3867 ntBASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 AC098934.4-201ENST00000564127 592 ntBASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
FAM90A16PA6NEW6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 IRX1P1-201ENST00000438849 1838 ntBASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 AL049812.1-201ENST00000432563 2267 ntBASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.24■□□□□ 0.19
FAM90A16PA6NEW6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
FAM90A16PA6NEW6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.23■□□□□ 0.19
FAM90A16PA6NEW6 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FAM90A16PA6NEW6 Z98044.1-201ENST00000632503 1764 ntBASIC16.23■□□□□ 0.19
FAM90A16PA6NEW6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FAM90A16PA6NEW6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FAM90A16PA6NEW6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FAM90A16PA6NEW6 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
FAM90A16PA6NEW6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
FAM90A16PA6NEW6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.23■□□□□ 0.19
FAM90A16PA6NEW6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FAM90A16PA6NEW6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FAM90A16PA6NEW6 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FAM90A16PA6NEW6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FAM90A16PA6NEW6 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FAM90A16PA6NEW6 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FAM90A16PA6NEW6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.23■□□□□ 0.19
FAM90A16PA6NEW6 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FAM90A16PA6NEW6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
FAM90A16PA6NEW6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FAM90A16PA6NEW6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms