Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT1A5YKK6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT1A5YKK6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT1A5YKK6 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.47■□□□□ 0.55
CNOT1A5YKK6 IL9RP2-201ENST00000423948 1312 ntBASIC18.47■□□□□ 0.55
CNOT1A5YKK6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT1A5YKK6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT1A5YKK6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.47■□□□□ 0.55
CNOT1A5YKK6 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT1A5YKK6 RNF126P1-202ENST00000569893 925 ntBASIC18.47■□□□□ 0.55
CNOT1A5YKK6 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.47■□□□□ 0.55
CNOT1A5YKK6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.47■□□□□ 0.55
CNOT1A5YKK6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.47■□□□□ 0.55
CNOT1A5YKK6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CNOT1A5YKK6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT1A5YKK6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT1A5YKK6 MIR662-201ENST00000384847 95 ntBASIC18.47■□□□□ 0.55
CNOT1A5YKK6 AL031284.1-201ENST00000419297 478 ntBASIC18.47■□□□□ 0.55
CNOT1A5YKK6 BX842568.4-201ENST00000421222 227 ntBASIC18.47■□□□□ 0.55
CNOT1A5YKK6 KRT18P67-201ENST00000432816 1264 ntBASIC18.47■□□□□ 0.55
CNOT1A5YKK6 PNN-202ENST00000553331 656 ntTSL 3 BASIC18.47■□□□□ 0.55
CNOT1A5YKK6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT1A5YKK6 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.47■□□□□ 0.55
CNOT1A5YKK6 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CNOT1A5YKK6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT1A5YKK6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT1A5YKK6 Z98882.1-201ENST00000622160 2253 ntBASIC18.46■□□□□ 0.55
CNOT1A5YKK6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT1A5YKK6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT1A5YKK6 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.46■□□□□ 0.55
CNOT1A5YKK6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.46■□□□□ 0.55
CNOT1A5YKK6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CNOT1A5YKK6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.46■□□□□ 0.55
CNOT1A5YKK6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.46■□□□□ 0.55
CNOT1A5YKK6 PHGDH-210ENST00000641115 1638 ntBASIC18.46■□□□□ 0.55
CNOT1A5YKK6 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT1A5YKK6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.46■□□□□ 0.55
CNOT1A5YKK6 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT1A5YKK6 KRT16P6-202ENST00000425692 1426 ntBASIC18.46■□□□□ 0.55
CNOT1A5YKK6 TMEM179-206ENST00000616017 1645 ntBASIC18.46■□□□□ 0.55
CNOT1A5YKK6 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.46■□□□□ 0.55
CNOT1A5YKK6 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.46■□□□□ 0.55
CNOT1A5YKK6 AL160286.2-201ENST00000567150 934 ntBASIC18.46■□□□□ 0.55
CNOT1A5YKK6 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.46■□□□□ 0.55
CNOT1A5YKK6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CNOT1A5YKK6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.46■□□□□ 0.55
CNOT1A5YKK6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 AC064862.7-201ENST00000604520 867 ntBASIC18.45■□□□□ 0.54
CNOT1A5YKK6 REXO1L6P-202ENST00000619970 1078 ntBASIC18.45■□□□□ 0.54
CNOT1A5YKK6 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CNOT1A5YKK6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 AL121772.3-201ENST00000610840 674 ntBASIC18.44■□□□□ 0.54
CNOT1A5YKK6 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 KRT8P26-201ENST00000534154 1276 ntBASIC18.44■□□□□ 0.54
CNOT1A5YKK6 AL353801.3-201ENST00000609898 542 ntBASIC18.44■□□□□ 0.54
CNOT1A5YKK6 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CNOT1A5YKK6 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms