Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC28.65■■■□□ 2.18
HFM1A2PYH4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC28.65■■■□□ 2.18
HFM1A2PYH4 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
HFM1A2PYH4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC28.65■■■□□ 2.18
HFM1A2PYH4 TK2-213ENST00000563369 882 ntTSL 5 BASIC28.65■■■□□ 2.18
HFM1A2PYH4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC28.65■■■□□ 2.18
HFM1A2PYH4 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC28.65■■■□□ 2.18
HFM1A2PYH4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
HFM1A2PYH4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
HFM1A2PYH4 TEX21P-204ENST00000641479 1693 ntBASIC28.65■■■□□ 2.18
HFM1A2PYH4 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC28.65■■■□□ 2.18
HFM1A2PYH4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC28.64■■■□□ 2.18
HFM1A2PYH4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC28.64■■■□□ 2.18
HFM1A2PYH4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
HFM1A2PYH4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC28.64■■■□□ 2.18
HFM1A2PYH4 TERF1P1-201ENST00000311003 1181 ntBASIC28.64■■■□□ 2.18
HFM1A2PYH4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
HFM1A2PYH4 AFG3L1P-217ENST00000557444 2447 ntBASIC28.64■■■□□ 2.18
HFM1A2PYH4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
HFM1A2PYH4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
HFM1A2PYH4 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC28.64■■■□□ 2.17
HFM1A2PYH4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
HFM1A2PYH4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC28.64■■■□□ 2.17
HFM1A2PYH4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC28.64■■■□□ 2.17
HFM1A2PYH4 PCDHAC2-203ENST00000615316 3011 ntBASIC28.63■■■□□ 2.17
HFM1A2PYH4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
HFM1A2PYH4 GAS2L1P1-201ENST00000420145 1480 ntBASIC28.63■■■□□ 2.17
HFM1A2PYH4 TMA16-209ENST00000513272 803 ntTSL 2 BASIC28.63■■■□□ 2.17
HFM1A2PYH4 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC28.63■■■□□ 2.17
HFM1A2PYH4 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
HFM1A2PYH4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC28.63■■■□□ 2.17
HFM1A2PYH4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
HFM1A2PYH4 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
HFM1A2PYH4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
HFM1A2PYH4 KRT18P22-201ENST00000402024 1347 ntBASIC28.63■■■□□ 2.17
HFM1A2PYH4 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC28.63■■■□□ 2.17
HFM1A2PYH4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
HFM1A2PYH4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC28.62■■■□□ 2.17
HFM1A2PYH4 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
HFM1A2PYH4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC28.62■■■□□ 2.17
HFM1A2PYH4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
HFM1A2PYH4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
HFM1A2PYH4 CBFB-203ENST00000561924 584 ntTSL 5 BASIC28.62■■■□□ 2.17
HFM1A2PYH4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC28.62■■■□□ 2.17
HFM1A2PYH4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
HFM1A2PYH4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC28.62■■■□□ 2.17
HFM1A2PYH4 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
HFM1A2PYH4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
HFM1A2PYH4 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC28.62■■■□□ 2.17
HFM1A2PYH4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
HFM1A2PYH4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC28.62■■■□□ 2.17
HFM1A2PYH4 HIST1H2APS4-201ENST00000362070 348 ntBASIC28.61■■■□□ 2.17
HFM1A2PYH4 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC28.61■■■□□ 2.17
HFM1A2PYH4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC28.61■■■□□ 2.17
HFM1A2PYH4 RBM42-202ENST00000586618 771 ntTSL 3 BASIC28.61■■■□□ 2.17
HFM1A2PYH4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC28.61■■■□□ 2.17
HFM1A2PYH4 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC28.61■■■□□ 2.17
HFM1A2PYH4 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC28.61■■■□□ 2.17
HFM1A2PYH4 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
HFM1A2PYH4 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
HFM1A2PYH4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
HFM1A2PYH4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
HFM1A2PYH4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC28.6■■■□□ 2.17
HFM1A2PYH4 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
HFM1A2PYH4 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC28.6■■■□□ 2.17
HFM1A2PYH4 AC007663.1-201ENST00000438948 1240 ntBASIC28.6■■■□□ 2.17
HFM1A2PYH4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC28.6■■■□□ 2.17
HFM1A2PYH4 RN7SL850P-201ENST00000579959 291 ntBASIC28.6■■■□□ 2.17
HFM1A2PYH4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
HFM1A2PYH4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC28.6■■■□□ 2.17
HFM1A2PYH4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC28.6■■■□□ 2.17
HFM1A2PYH4 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
HFM1A2PYH4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
HFM1A2PYH4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
HFM1A2PYH4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
HFM1A2PYH4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC28.6■■■□□ 2.17
HFM1A2PYH4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC28.59■■■□□ 2.17
HFM1A2PYH4 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC28.59■■■□□ 2.17
HFM1A2PYH4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
HFM1A2PYH4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC28.59■■■□□ 2.17
HFM1A2PYH4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
HFM1A2PYH4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC28.59■■■□□ 2.17
HFM1A2PYH4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC28.59■■■□□ 2.17
HFM1A2PYH4 ECEL1P2-202ENST00000465689 757 ntBASIC28.59■■■□□ 2.17
HFM1A2PYH4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
HFM1A2PYH4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC28.58■■■□□ 2.17
HFM1A2PYH4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
HFM1A2PYH4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
HFM1A2PYH4 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
HFM1A2PYH4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
HFM1A2PYH4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC28.58■■■□□ 2.17
HFM1A2PYH4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC28.58■■■□□ 2.17
HFM1A2PYH4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC28.58■■■□□ 2.17
HFM1A2PYH4 AC010203.1-204ENST00000548782 407 ntBASIC28.58■■■□□ 2.17
HFM1A2PYH4 AC010653.2-201ENST00000623505 997 ntBASIC28.58■■■□□ 2.17
HFM1A2PYH4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
HFM1A2PYH4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
HFM1A2PYH4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
HFM1A2PYH4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
HFM1A2PYH4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC28.57■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms