Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 AC026366.1-201ENST00000488803 879 ntBASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 RNA5SP413-201ENST00000516373 109 ntBASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC13.63□□□□□ -0.23
TRBV6-4A0A1B0GX49 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 NBPF21P-201ENST00000425093 1451 ntBASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 AC008403.3-201ENST00000598924 454 ntBASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 AC087289.5-201ENST00000586076 3175 ntBASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRBV6-4A0A1B0GX49 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 AC098818.2-201ENST00000564925 2320 ntBASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 TEX21P-204ENST00000641479 1693 ntBASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
TRBV6-4A0A1B0GX49 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms