Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 RBM17P2-201ENST00000616397 1405 ntBASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 PRORSD1P-202ENST00000563365 2154 ntBASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 AC116050.2-201ENST00000612102 1779 ntBASIC14.22□□□□□ -0.13
TRAV8-6A0A0B4J262 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 RARRES2P11-201ENST00000635158 484 ntBASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
TRAV8-6A0A0B4J262 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV8-6A0A0B4J262 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.21□□□□□ -0.14
TRAV8-6A0A0B4J262 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC14.21□□□□□ -0.14
TRAV8-6A0A0B4J262 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.21□□□□□ -0.14
TRAV8-6A0A0B4J262 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV8-6A0A0B4J262 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.21□□□□□ -0.14
TRAV8-6A0A0B4J262 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
TRAV8-6A0A0B4J262 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 PBX1-209ENST00000485769 834 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 AC011767.1-201ENST00000617410 1153 ntBASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRAV8-6A0A0B4J262 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAV8-6A0A0B4J262 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-6A0A0B4J262 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAV8-6A0A0B4J262 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC14.19□□□□□ -0.14
TRAV8-6A0A0B4J262 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-6A0A0B4J262 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
TRAV8-6A0A0B4J262 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
TRAV8-6A0A0B4J262 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV8-6A0A0B4J262 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-6A0A0B4J262 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-6A0A0B4J262 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-6A0A0B4J262 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-6A0A0B4J262 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-6A0A0B4J262 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
TRAV8-6A0A0B4J262 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-6A0A0B4J262 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.19□□□□□ -0.14
TRAV8-6A0A0B4J262 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
TRAV8-6A0A0B4J262 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
TRAV8-6A0A0B4J262 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
TRAV8-6A0A0B4J262 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms