Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV8-4A0A0B4J246 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV8-4A0A0B4J246 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.52□□□□□ -0.24
TRAV8-4A0A0B4J246 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV8-4A0A0B4J246 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC13.52□□□□□ -0.24
TRAV8-4A0A0B4J246 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.24
TRAV8-4A0A0B4J246 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
TRAV8-4A0A0B4J246 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.52□□□□□ -0.24
TRAV8-4A0A0B4J246 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV8-4A0A0B4J246 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV8-4A0A0B4J246 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV8-4A0A0B4J246 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.24
TRAV8-4A0A0B4J246 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 AC133552.2-202ENST00000575694 574 ntBASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 KRT8P20-201ENST00000423953 1409 ntBASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 BX119927.1-201ENST00000636596 1552 ntBASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV8-4A0A0B4J246 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 GOLGA2P11-201ENST00000562660 1621 ntBASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 KRT8P17-201ENST00000453110 1448 ntBASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 AC010980.2-201ENST00000587099 1412 ntBASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 TCF3P1-201ENST00000423021 1937 ntBASIC13.51□□□□□ -0.25
TRAV8-4A0A0B4J246 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 ISCU-212ENST00000547005 795 ntTSL 3 BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 AL031963.3-201ENST00000606441 850 ntBASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 AC080038.1-201ENST00000611274 1154 ntBASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.5□□□□□ -0.25
TRAV8-4A0A0B4J246 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms