Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CACNA1C-205ENST00000399591 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 CACNA1C-206ENST00000399595 6535 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 HSP90AA2P-201ENST00000530115 2196 ntBASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 S100A7A-203ENST00000368729 4279 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 EFTUD2-201ENST00000402521 3045 ntTSL 2 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 STAG3-218ENST00000615138 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 METTL2B-204ENST00000480046 5743 ntTSL 2 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 MED12-203ENST00000374102 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 PTPRG-203ENST00000474889 9021 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 ALOXE3-202ENST00000380149 3362 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 MYH16-203ENST00000439784 5836 ntBASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 CORIN-202ENST00000502252 3112 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 ACAP2-215ENST00000618471 3207 ntTSL 5 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 DSTYK-201ENST00000367161 7739 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 AL669983.1-201ENST00000306634 318 ntBASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 ZMYM3-201ENST00000314425 5536 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 SRGAP2C-202ENST00000367123 7204 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 RNU1-73P-201ENST00000383971 164 ntBASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 ALDOAP2-201ENST00000398050 1076 ntBASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 AC079602.1-201ENST00000412750 271 ntBASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 SNRPCP9-201ENST00000417250 207 ntBASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 AC004830.1-201ENST00000420449 285 ntTSL 5 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 HMGN2P30-201ENST00000423237 256 ntBASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 TARM1-201ENST00000432826 897 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 SNRPBP1-201ENST00000443634 282 ntBASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 AL450471.1-201ENST00000447509 127 ntBASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 IGHJ1P-201ENST00000450690 55 ntBASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 RN7SL419P-201ENST00000471592 287 ntBASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 MYL5-205ENST00000505477 584 ntTSL 3 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 ADAM20P3-201ENST00000508710 2106 ntBASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 GAPDHP44-201ENST00000513513 1007 ntBASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 Y_RNA.681-201ENST00000516445 113 ntBASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 SPIDR-205ENST00000518060 482 ntAPPRIS ALT2 TSL 3 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 AC027419.1-201ENST00000522976 328 ntBASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 SRSF5-204ENST00000553548 526 ntTSL 4 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 KCNH6-205ENST00000583023 3821 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 AL357518.1-201ENST00000607169 430 ntBASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 MIR376B-201ENST00000614515 100 ntBASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 AC005086.4-201ENST00000623065 213 ntBASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 AC006435.5-201ENST00000624486 112 ntBASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 TRERF1-201ENST00000340840 4174 ntTSL 5 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 NOS2-202ENST00000621962 3345 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 EYA1-204ENST00000388741 3404 ntTSL 5 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 SIN3A-201ENST00000360439 5050 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 KDM2B-206ENST00000538046 2301 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 PTPRB-201ENST00000261266 6110 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 WDR36-206ENST00000612402 6592 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 SOX5-210ENST00000537393 2769 ntTSL 5 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 RAB27A-202ENST00000396307 3459 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 CSRNP3-203ENST00000409420 2545 ntTSL 5 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 PRRG1-208ENST00000542554 4600 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 KIAA0141-202ENST00000432126 4970 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 SMIM19-204ENST00000438528 2958 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 SORL1-211ENST00000532694 3692 ntTSL 2 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 CNR1-204ENST00000428600 1550 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 TMEM108-211ENST00000515826 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 NR2C1-202ENST00000333003 4143 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
KRTAP3-3Q9BYR6 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 CCSER1-209ENST00000509176 5847 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 MAPK10-301ENST00000641313 2482 ntBASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 KIAA1841-203ENST00000402291 4516 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 ADGRE1-205ENST00000450315 2567 ntTSL 2 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 ZMYND8-205ENST00000360911 4991 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 MCC-209ENST00000515367 3844 ntTSL 5 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 CACNB2-204ENST00000377315 3461 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 UBA1-203ENST00000377351 3466 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 MYH13-202ENST00000418404 6067 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 AC010401.2-201ENST00000575137 4934 ntBASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 ZNF780A-201ENST00000340963 3674 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 KLHL15-201ENST00000328046 6272 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 NPHP1-207ENST00000445609 2513 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 ZKSCAN8-202ENST00000457389 2071 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 PHACTR1-201ENST00000332995 5332 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 ZNF772-201ENST00000343280 5419 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 CDHR2-201ENST00000261944 4068 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 SPIN3-205ENST00000638289 4614 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 ZNF3-207ENST00000424697 2718 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 BTAF1-201ENST00000265990 7250 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 SAA2-201ENST00000256733 563 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KRTAP3-3Q9BYR6 RN7SKP134-201ENST00000363960 269 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 166.2 ms