Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.98□□□□□ -1.29
HOXA2O43364 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.98□□□□□ -1.29
HOXA2O43364 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
HOXA2O43364 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
HOXA2O43364 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
HOXA2O43364 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HOXA2O43364 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
HOXA2O43364 AC110597.1-201ENST00000562669 3176 ntBASIC6.98□□□□□ -1.29
HOXA2O43364 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA2O43364 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA2O43364 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA2O43364 WBP11P1-201ENST00000562560 1931 ntBASIC6.97□□□□□ -1.29
HOXA2O43364 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
HOXA2O43364 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.97□□□□□ -1.29
HOXA2O43364 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.97□□□□□ -1.29
HOXA2O43364 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.97□□□□□ -1.29
HOXA2O43364 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.97□□□□□ -1.29
HOXA2O43364 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA2O43364 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
HOXA2O43364 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA2O43364 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC6.97□□□□□ -1.29
HOXA2O43364 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA2O43364 COX6B1P3-201ENST00000312310 260 ntBASIC6.97□□□□□ -1.29
HOXA2O43364 SNORD116-11-201ENST00000383882 92 ntBASIC6.97□□□□□ -1.29
HOXA2O43364 AL391417.1-201ENST00000404100 426 ntBASIC6.97□□□□□ -1.29
HOXA2O43364 SNORA77.2-201ENST00000408571 112 ntBASIC6.97□□□□□ -1.29
HOXA2O43364 RN7SKP281-201ENST00000410472 352 ntBASIC6.97□□□□□ -1.29
HOXA2O43364 OFD1P1Y-201ENST00000411756 1225 ntBASIC6.97□□□□□ -1.29
HOXA2O43364 POLHP1-201ENST00000411806 470 ntBASIC6.97□□□□□ -1.29
HOXA2O43364 AL356968.1-201ENST00000416622 474 ntBASIC6.97□□□□□ -1.29
HOXA2O43364 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC6.97□□□□□ -1.29
HOXA2O43364 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA2O43364 PDSS1P1-201ENST00000422953 1114 ntBASIC6.97□□□□□ -1.29
HOXA2O43364 LAMTOR5-AS1-201ENST00000444238 881 ntTSL 5 BASIC6.97□□□□□ -1.29
HOXA2O43364 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.97□□□□□ -1.29
HOXA2O43364 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC6.97□□□□□ -1.29
HOXA2O43364 AC104634.1-201ENST00000452720 462 ntBASIC6.97□□□□□ -1.29
HOXA2O43364 RN7SL221P-201ENST00000466190 281 ntBASIC6.97□□□□□ -1.29
HOXA2O43364 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.97□□□□□ -1.29
HOXA2O43364 RNU6-1016P-201ENST00000516689 94 ntBASIC6.97□□□□□ -1.29
HOXA2O43364 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.97□□□□□ -1.29
HOXA2O43364 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.97□□□□□ -1.29
HOXA2O43364 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC6.97□□□□□ -1.29
HOXA2O43364 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.97□□□□□ -1.29
HOXA2O43364 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA2O43364 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.97□□□□□ -1.29
HOXA2O43364 AL358913.1-201ENST00000554342 121 ntBASIC6.97□□□□□ -1.29
HOXA2O43364 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC6.97□□□□□ -1.29
HOXA2O43364 AC138915.4-201ENST00000565549 4147 ntBASIC6.97□□□□□ -1.29
HOXA2O43364 MIR5583-1-201ENST00000580941 59 ntBASIC6.97□□□□□ -1.29
HOXA2O43364 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC6.97□□□□□ -1.29
HOXA2O43364 AL121612.2-201ENST00000612261 482 ntBASIC6.97□□□□□ -1.29
HOXA2O43364 AL352984.2-202ENST00000613699 155 ntBASIC6.97□□□□□ -1.29
HOXA2O43364 AP001264.1-201ENST00000620602 703 ntBASIC6.97□□□□□ -1.29
HOXA2O43364 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.97□□□□□ -1.29
HOXA2O43364 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA2O43364 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA2O43364 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA2O43364 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA2O43364 SERPINB8-203ENST00000397985 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA2O43364 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA2O43364 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA2O43364 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.97□□□□□ -1.29
HOXA2O43364 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
HOXA2O43364 FLJ42393-201ENST00000623801 2270 ntBASIC6.97□□□□□ -1.29
HOXA2O43364 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.97□□□□□ -1.29
HOXA2O43364 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.97□□□□□ -1.29
HOXA2O43364 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.97□□□□□ -1.29
HOXA2O43364 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HOXA2O43364 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.96□□□□□ -1.29
HOXA2O43364 LPAL2-203ENST00000454031 2498 ntBASIC6.96□□□□□ -1.29
HOXA2O43364 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC6.96□□□□□ -1.29
HOXA2O43364 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.29
HOXA2O43364 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
HOXA2O43364 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.96□□□□□ -1.29
HOXA2O43364 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.96□□□□□ -1.29
HOXA2O43364 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
HOXA2O43364 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
HOXA2O43364 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC6.96□□□□□ -1.29
HOXA2O43364 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
HOXA2O43364 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
HOXA2O43364 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.96□□□□□ -1.3
HOXA2O43364 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.96□□□□□ -1.3
HOXA2O43364 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
HOXA2O43364 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
HOXA2O43364 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HOXA2O43364 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
HOXA2O43364 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.96□□□□□ -1.3
HOXA2O43364 SNORD3E-201ENST00000362899 217 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 LCN1P2-201ENST00000372030 223 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 RNU1-46P-201ENST00000384425 164 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 Y_RNA.552-201ENST00000384665 112 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 AC004386.1-201ENST00000393214 761 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 AL359643.1-201ENST00000404109 423 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
HOXA2O43364 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.96□□□□□ -1.3
HOXA2O43364 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.96□□□□□ -1.3
HOXA2O43364 SNAP23P1-201ENST00000433229 246 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 FTLP19-201ENST00000433300 394 ntBASIC6.96□□□□□ -1.3
HOXA2O43364 AC094019.1-201ENST00000434678 472 ntBASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms