Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC7.12□□□□□ -1.27
PTPN5P54829 uc_338.12-201ENST00000616344 181 ntBASIC7.12□□□□□ -1.27
PTPN5P54829 AC011155.2-201ENST00000623202 216 ntBASIC7.12□□□□□ -1.27
PTPN5P54829 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7.12□□□□□ -1.27
PTPN5P54829 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
PTPN5P54829 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PTPN5P54829 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PTPN5P54829 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
PTPN5P54829 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
PTPN5P54829 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
PTPN5P54829 LYSMD3-203ENST00000500869 3863 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PTPN5P54829 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.12□□□□□ -1.27
PTPN5P54829 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.12□□□□□ -1.27
PTPN5P54829 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.12□□□□□ -1.27
PTPN5P54829 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC7.12□□□□□ -1.27
PTPN5P54829 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PTPN5P54829 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
PTPN5P54829 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PTPN5P54829 CAST-202ENST00000325674 3356 ntTSL 5 BASIC7.11□□□□□ -1.27
PTPN5P54829 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
PTPN5P54829 AC074029.4-201ENST00000624796 1859 ntBASIC7.11□□□□□ -1.27
PTPN5P54829 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
PTPN5P54829 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PTPN5P54829 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
PTPN5P54829 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
PTPN5P54829 RNU6-1266P-201ENST00000362794 105 ntBASIC7.11□□□□□ -1.27
PTPN5P54829 RNA5SP472-201ENST00000363868 119 ntBASIC7.11□□□□□ -1.27
PTPN5P54829 Y_RNA.183-201ENST00000363882 113 ntBASIC7.11□□□□□ -1.27
PTPN5P54829 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC7.11□□□□□ -1.27
PTPN5P54829 MIR937-201ENST00000401271 86 ntBASIC7.11□□□□□ -1.27
PTPN5P54829 AL583834.1-201ENST00000406943 343 ntBASIC7.11□□□□□ -1.27
PTPN5P54829 Y_RNA.597-201ENST00000410463 100 ntBASIC7.11□□□□□ -1.27
PTPN5P54829 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC7.11□□□□□ -1.27
PTPN5P54829 RPL7P37-201ENST00000425095 738 ntBASIC7.11□□□□□ -1.27
PTPN5P54829 AL445305.1-201ENST00000432577 575 ntBASIC7.11□□□□□ -1.27
PTPN5P54829 CEACAMP7-201ENST00000444105 496 ntBASIC7.11□□□□□ -1.27
PTPN5P54829 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC7.11□□□□□ -1.27
PTPN5P54829 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC7.11□□□□□ -1.27
PTPN5P54829 AC011225.1-201ENST00000457751 369 ntBASIC7.11□□□□□ -1.27
PTPN5P54829 AC104563.1-201ENST00000476147 376 ntBASIC7.11□□□□□ -1.27
PTPN5P54829 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC7.11□□□□□ -1.27
PTPN5P54829 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC7.11□□□□□ -1.27
PTPN5P54829 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC7.11□□□□□ -1.27
PTPN5P54829 DEFB109D-201ENST00000529497 240 ntBASIC7.11□□□□□ -1.27
PTPN5P54829 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC7.11□□□□□ -1.27
PTPN5P54829 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PTPN5P54829 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC7.11□□□□□ -1.27
PTPN5P54829 NPM1P42-201ENST00000560329 862 ntBASIC7.11□□□□□ -1.27
PTPN5P54829 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
PTPN5P54829 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC7.11□□□□□ -1.27
PTPN5P54829 AC025857.2-201ENST00000602711 238 ntBASIC7.11□□□□□ -1.27
PTPN5P54829 AL031320.1-201ENST00000604177 357 ntBASIC7.11□□□□□ -1.27
PTPN5P54829 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC7.11□□□□□ -1.27
PTPN5P54829 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.11□□□□□ -1.27
PTPN5P54829 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.11□□□□□ -1.27
PTPN5P54829 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC7.11□□□□□ -1.27
PTPN5P54829 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PTPN5P54829 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC7.11□□□□□ -1.27
PTPN5P54829 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
PTPN5P54829 MTFR1L-207ENST00000466284 3262 ntTSL 2 BASIC7.11□□□□□ -1.27
PTPN5P54829 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
PTPN5P54829 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PTPN5P54829 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PTPN5P54829 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
PTPN5P54829 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC7.11□□□□□ -1.27
PTPN5P54829 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
PTPN5P54829 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC7.11□□□□□ -1.27
PTPN5P54829 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PTPN5P54829 SAMMSON-226ENST00000642089 1582 ntBASIC7.11□□□□□ -1.27
PTPN5P54829 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PTPN5P54829 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
PTPN5P54829 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.11□□□□□ -1.27
PTPN5P54829 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
PTPN5P54829 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
PTPN5P54829 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PTPN5P54829 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
PTPN5P54829 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.11□□□□□ -1.27
PTPN5P54829 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.11□□□□□ -1.27
PTPN5P54829 AC007938.1-201ENST00000562524 2902 ntBASIC7.11□□□□□ -1.27
PTPN5P54829 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC7.11□□□□□ -1.27
PTPN5P54829 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PTPN5P54829 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC7.1□□□□□ -1.27
PTPN5P54829 NR1H4-206ENST00000548884 2884 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
PTPN5P54829 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.1□□□□□ -1.27
PTPN5P54829 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
PTPN5P54829 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
PTPN5P54829 HDAC1P2-201ENST00000453661 1398 ntBASIC7.1□□□□□ -1.27
PTPN5P54829 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.1□□□□□ -1.27
PTPN5P54829 NAALAD2-201ENST00000321955 3035 ntTSL 2 BASIC7.1□□□□□ -1.27
PTPN5P54829 FHL1-227ENST00000628568 2304 ntTSL 5 BASIC7.1□□□□□ -1.27
PTPN5P54829 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
PTPN5P54829 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC7.1□□□□□ -1.27
PTPN5P54829 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC7.1□□□□□ -1.27
PTPN5P54829 Y_RNA.471-201ENST00000384312 102 ntBASIC7.1□□□□□ -1.27
PTPN5P54829 SNORA17A-201ENST00000391185 133 ntBASIC7.1□□□□□ -1.27
PTPN5P54829 U3.39-201ENST00000408569 239 ntBASIC7.1□□□□□ -1.27
PTPN5P54829 RN7SKP254-201ENST00000410685 310 ntBASIC7.1□□□□□ -1.27
PTPN5P54829 AC079355.1-201ENST00000421770 223 ntBASIC7.1□□□□□ -1.27
PTPN5P54829 CYP4F32P-201ENST00000426492 504 ntBASIC7.1□□□□□ -1.27
PTPN5P54829 AC016027.5-201ENST00000427227 210 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms