RNA–Protein interactions for RNA: ENST00000529497.2

DEFB109D-201, Transcript of defensin beta 109D (pseudogene), humanhuman

BASIC

Gene DEFB109D, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEFB109D-201ENST00000529497 AEBP2Q6ZN18 517 aaPredicted RBP17.25■□□□□ 0.35
DEFB109D-201ENST00000529497 CHIC1Q5VXU3 224 aa16.83■□□□□ 0.28
DEFB109D-201ENST00000529497 PHF23Q9BUL5 403 aaPredicted RBP14.86□□□□□ -0.03
DEFB109D-201ENST00000529497 SENP3Q9H4L4 574 aaPredicted RBP14.52□□□□□ -0.09
DEFB109D-201ENST00000529497 PLPPR3Q6T4P5 718 aa13.62□□□□□ -0.23
DEFB109D-201ENST00000529497 FOXD1Q16676 465 aa13.55□□□□□ -0.24
DEFB109D-201ENST00000529497 PPP6R1Q9UPN7 881 aa13.1□□□□□ -0.31
DEFB109D-201ENST00000529497 ADRA2BP18089 450 aa13.04□□□□□ -0.32
DEFB109D-201ENST00000529497 PIAS4Q8N2W9 510 aaPredicted RBP12.71□□□□□ -0.37
DEFB109D-201ENST00000529497 MSH5O43196 834 aa12.39□□□□□ -0.43
DEFB109D-201ENST00000529497 PPP4R3CPQ6ZMV5 832 aa12.04□□□□□ -0.48
DEFB109D-201ENST00000529497 KCNA4P22459 653 aa11.84□□□□□ -0.51
DEFB109D-201ENST00000529497 MAPK8IP2Q13387 824 aaPredicted RBP11.84□□□□□ -0.51
DEFB109D-201ENST00000529497 SCAF1Q9H7N4 1312 aaKnown RBP11.83□□□□□ -0.52
DEFB109D-201ENST00000529497 NCBP3Q53F19 620 aaKnown RBP11.67□□□□□ -0.54
DEFB109D-201ENST00000529497 CNKSR2Q8WXI2 1034 aa11.67□□□□□ -0.54
DEFB109D-201ENST00000529497 DMRT2Q9Y5R5 561 aa11.64□□□□□ -0.55
DEFB109D-201ENST00000529497 NPM3O75607 178 aaKnown RBP11.59□□□□□ -0.55
DEFB109D-201ENST00000529497 RNF216Q9NWF9 866 aaPredicted RBP11.45□□□□□ -0.58
DEFB109D-201ENST00000529497 HOXD11P31277 338 aaPredicted RBP11.43□□□□□ -0.58
DEFB109D-201ENST00000529497 DNAJC5BQ9UF47 199 aa11.31□□□□□ -0.6
DEFB109D-201ENST00000529497 POTEDQ86YR6 584 aa11.27□□□□□ -0.61
DEFB109D-201ENST00000529497 SLC4A1APQ9BWU0 796 aaKnown RBP11.22□□□□□ -0.61
DEFB109D-201ENST00000529497 DCAF8L1A6NGE4 600 aa11.02□□□□□ -0.65
DEFB109D-201ENST00000529497 SLC4A2P04920 1241 aa10.97□□□□□ -0.65
DEFB109D-201ENST00000529497 ZBTB22O15209 634 aa10.94□□□□□ -0.66
DEFB109D-201ENST00000529497 EHMT2Q96KQ7 1210 aa10.93□□□□□ -0.66
DEFB109D-201ENST00000529497 CSRNP3Q8WYN3 585 aa10.87□□□□□ -0.67
DEFB109D-201ENST00000529497 FOXD4L1Q9NU39 408 aa10.83□□□□□ -0.68
DEFB109D-201ENST00000529497 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.8□□□□□ -0.68
DEFB109D-201ENST00000529497 U3KPZ7 1027 aaPredicted RBP10.71□□□□□ -0.69
DEFB109D-201ENST00000529497 RNF39Q9H2S5 420 aa10.68□□□□□ -0.7
DEFB109D-201ENST00000529497 MYCNP04198 464 aaPredicted RBP10.66□□□□□ -0.7
DEFB109D-201ENST00000529497 C1QBPQ07021 282 aaKnown RBP10.52□□□□□ -0.73
DEFB109D-201ENST00000529497 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.48□□□□□ -0.73
DEFB109D-201ENST00000529497 HNRNPUL2Q1KMD3 747 aaKnown RBP10.48□□□□□ -0.73
DEFB109D-201ENST00000529497 SAMD1Q6SPF0 538 aaPredicted RBP10.48□□□□□ -0.73
DEFB109D-201ENST00000529497 ATXN8OSP0DMR3 200 aa10.46□□□□□ -0.73
DEFB109D-201ENST00000529497 ATF5Q9Y2D1 282 aaPredicted RBP10.45□□□□□ -0.74
DEFB109D-201ENST00000529497 SPINK5Q9NQ38 1064 aaPredicted RBP10.4□□□□□ -0.74
DEFB109D-201ENST00000529497 APLP2Q06481 763 aa10.34□□□□□ -0.75
DEFB109D-201ENST00000529497 CACNB1Q02641 598 aaPredicted RBP10.3□□□□□ -0.76
DEFB109D-201ENST00000529497 CAPN15O75808 1086 aa10.28□□□□□ -0.76
DEFB109D-201ENST00000529497 TRHP20396 242 aaPredicted RBP10.24□□□□□ -0.77
DEFB109D-201ENST00000529497 ZNF219Q9P2Y4 722 aaPredicted RBP10.24□□□□□ -0.77
DEFB109D-201ENST00000529497 DSG3P32926 999 aa10.17□□□□□ -0.78
DEFB109D-201ENST00000529497 ABCB7O75027 752 aa10.12□□□□□ -0.79
DEFB109D-201ENST00000529497 POLA2Q14181 598 aa10.12□□□□□ -0.79
DEFB109D-201ENST00000529497 MKRN4PQ13434 485 aaPredicted RBP10.01□□□□□ -0.81
DEFB109D-201ENST00000529497 ZBTB12Q9Y330 459 aaPredicted RBP9.91□□□□□ -0.82
DEFB109D-201ENST00000529497 FBLN2P98095 1184 aa9.88□□□□□ -0.83
DEFB109D-201ENST00000529497 OSCARQ8IYS5 282 aa9.78□□□□□ -0.84
DEFB109D-201ENST00000529497 FKBP8Q14318 412 aa9.75□□□□□ -0.85
DEFB109D-201ENST00000529497 SPDYE4A6NLX3 237 aa9.71□□□□□ -0.86
DEFB109D-201ENST00000529497 SPDYE2BA6NHP3 402 aa9.68□□□□□ -0.86
DEFB109D-201ENST00000529497 SPDYE6P0CI01 402 aa9.68□□□□□ -0.86
DEFB109D-201ENST00000529497 SPDYE2Q495Y8 402 aa9.68□□□□□ -0.86
DEFB109D-201ENST00000529497 SSUH2Q9Y2M2 353 aa9.67□□□□□ -0.86
DEFB109D-201ENST00000529497 PROM2Q8N271 834 aa9.66□□□□□ -0.86
DEFB109D-201ENST00000529497 ZNF692Q9BU19 519 aaPredicted RBP9.63□□□□□ -0.87
DEFB109D-201ENST00000529497 RBM42Q9BTD8 480 aaKnown RBP9.61□□□□□ -0.87
DEFB109D-201ENST00000529497 AKT1S1Q96B36 256 aa9.54□□□□□ -0.88
DEFB109D-201ENST00000529497 PABPN1Q86U42 306 aaKnown RBP eCLIP9.53□□□□□ -0.88
DEFB109D-201ENST00000529497 REM2Q8IYK8 340 aaPredicted RBP9.48□□□□□ -0.89
DEFB109D-201ENST00000529497 PITPNM1O00562 1244 aa9.37□□□□□ -0.91
DEFB109D-201ENST00000529497 SPDYE1Q8NFV5 336 aaPredicted RBP9.36□□□□□ -0.91
DEFB109D-201ENST00000529497 FBXO3Q9UK99 471 aa9.35□□□□□ -0.91
DEFB109D-201ENST00000529497 STAG3Q9UJ98 1225 aa9.33□□□□□ -0.92
DEFB109D-201ENST00000529497 VASPP50552 380 aaPredicted RBP9.29□□□□□ -0.92
DEFB109D-201ENST00000529497 CLEC11AQ9Y240 323 aa9.29□□□□□ -0.92
DEFB109D-201ENST00000529497 CHRDL2Q6WN34 429 aa9.24□□□□□ -0.93
DEFB109D-201ENST00000529497 PRR29P0C7W0 189 aa9.23□□□□□ -0.93
DEFB109D-201ENST00000529497 CREBZFQ9NS37 354 aa9.21□□□□□ -0.94
DEFB109D-201ENST00000529497 FXR2P51116 673 aaKnown RBP eCLIP9.2□□□□□ -0.94
DEFB109D-201ENST00000529497 IFNLR1Q8IU57 520 aaPredicted RBP9.2□□□□□ -0.94
DEFB109D-201ENST00000529497 MIER1Q8N108 512 aa9.17□□□□□ -0.94
DEFB109D-201ENST00000529497 MNX1P50219 401 aaPredicted RBP9.16□□□□□ -0.94
DEFB109D-201ENST00000529497 PIP4P2Q8N4L2 257 aa9.16□□□□□ -0.94
DEFB109D-201ENST00000529497 PLCD3Q8N3E9 789 aa9.14□□□□□ -0.95
DEFB109D-201ENST00000529497 CHADLQ6NUI6 762 aa9.13□□□□□ -0.95
DEFB109D-201ENST00000529497 PRKAR2AP13861 404 aaKnown RBP9.1□□□□□ -0.95
DEFB109D-201ENST00000529497 FARP1Q9Y4F1 1045 aaPredicted RBP9.05□□□□□ -0.96
DEFB109D-201ENST00000529497 PLEKHG5O94827 1062 aa9.04□□□□□ -0.96
DEFB109D-201ENST00000529497 KLHL34Q8N239 644 aa9.04□□□□□ -0.96
DEFB109D-201ENST00000529497 NUBP1P53384 320 aa9.02□□□□□ -0.97
DEFB109D-201ENST00000529497 SPOCK2Q92563 424 aa9.02□□□□□ -0.97
DEFB109D-201ENST00000529497 ZBTB47Q9UFB7 747 aaPredicted RBP9.02□□□□□ -0.97
DEFB109D-201ENST00000529497 RTN4Q9NQC3 1192 aaKnown RBP8.98□□□□□ -0.97
DEFB109D-201ENST00000529497 RASEFQ8IZ41 740 aa8.96□□□□□ -0.98
DEFB109D-201ENST00000529497 NPM1P06748 294 aaKnown RBP eCLIP8.95□□□□□ -0.98
DEFB109D-201ENST00000529497 AMER1Q5JTC6 1135 aaPredicted RBP8.93□□□□□ -0.98
DEFB109D-201ENST00000529497 PKD2Q13563 968 aa8.92□□□□□ -0.98
DEFB109D-201ENST00000529497 POTEHQ6S545 545 aa8.91□□□□□ -0.98
DEFB109D-201ENST00000529497 NISCHQ9Y2I1 1504 aa8.89□□□□□ -0.99
DEFB109D-201ENST00000529497 C19orf67A6NJJ6 358 aa8.88□□□□□ -0.99
DEFB109D-201ENST00000529497 FAM212AQ96EL1 285 aa8.85□□□□□ -0.99
DEFB109D-201ENST00000529497 EVX2Q03828 476 aa8.84□□□□□ -0.99
DEFB109D-201ENST00000529497 GSE1Q14687 1217 aa8.84□□□□□ -0.99
DEFB109D-201ENST00000529497 DCAF8Q5TAQ9 597 aa8.84□□□□□ -0.99
DEFB109D-201ENST00000529497 TSPYL2Q9H2G4 693 aaPredicted RBP8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms