Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFC1P35251 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFC1P35251 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFC1P35251 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFC1P35251 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFC1P35251 SNORD113-6-201ENST00000363345 75 ntBASIC4.67□□□□□ -1.66
RFC1P35251 snoZ40.1-201ENST00000364540 72 ntBASIC4.67□□□□□ -1.66
RFC1P35251 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.67□□□□□ -1.66
RFC1P35251 RNU1-44P-201ENST00000384453 163 ntBASIC4.67□□□□□ -1.66
RFC1P35251 RNU6-83P-201ENST00000384568 112 ntBASIC4.67□□□□□ -1.66
RFC1P35251 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFC1P35251 SNORA11C-201ENST00000408532 129 ntBASIC4.67□□□□□ -1.66
RFC1P35251 AC009237.10-201ENST00000414112 510 ntBASIC4.67□□□□□ -1.66
RFC1P35251 SNRPFP1-201ENST00000414761 252 ntBASIC4.67□□□□□ -1.66
RFC1P35251 AC114814.2-201ENST00000419195 485 ntBASIC4.67□□□□□ -1.66
RFC1P35251 RPF2P1-201ENST00000424137 906 ntBASIC4.67□□□□□ -1.66
RFC1P35251 RPL30P3-201ENST00000424262 333 ntBASIC4.67□□□□□ -1.66
RFC1P35251 RPEP3-201ENST00000425462 676 ntBASIC4.67□□□□□ -1.66
RFC1P35251 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.67□□□□□ -1.66
RFC1P35251 SETP8-201ENST00000435341 628 ntBASIC4.67□□□□□ -1.66
RFC1P35251 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.67□□□□□ -1.66
RFC1P35251 DDX39BP2-208ENST00000453923 258 ntBASIC4.67□□□□□ -1.66
RFC1P35251 RPS27AP17-201ENST00000463344 455 ntBASIC4.67□□□□□ -1.66
RFC1P35251 RPL23AP72-201ENST00000492447 435 ntBASIC4.67□□□□□ -1.66
RFC1P35251 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.67□□□□□ -1.66
RFC1P35251 AC113430.1-201ENST00000506872 718 ntBASIC4.67□□□□□ -1.66
RFC1P35251 AC034244.1-201ENST00000507687 207 ntBASIC4.67□□□□□ -1.66
RFC1P35251 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.67□□□□□ -1.66
RFC1P35251 OR5AN2P-201ENST00000534535 896 ntBASIC4.67□□□□□ -1.66
RFC1P35251 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.67□□□□□ -1.66
RFC1P35251 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.67□□□□□ -1.66
RFC1P35251 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.67□□□□□ -1.66
RFC1P35251 AC090695.1-201ENST00000561269 1222 ntBASIC4.67□□□□□ -1.66
RFC1P35251 MIR5708-201ENST00000579723 85 ntBASIC4.67□□□□□ -1.66
RFC1P35251 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC4.67□□□□□ -1.66
RFC1P35251 AC021171.1-201ENST00000603137 706 ntBASIC4.67□□□□□ -1.66
RFC1P35251 AC008782.1-201ENST00000603386 430 ntBASIC4.67□□□□□ -1.66
RFC1P35251 AC114878.2-201ENST00000604863 1251 ntBASIC4.67□□□□□ -1.66
RFC1P35251 AC010857.1-201ENST00000606398 594 ntBASIC4.67□□□□□ -1.66
RFC1P35251 AC091979.2-201ENST00000607514 214 ntBASIC4.67□□□□□ -1.66
RFC1P35251 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.67□□□□□ -1.66
RFC1P35251 AC109454.4-201ENST00000623411 649 ntBASIC4.67□□□□□ -1.66
RFC1P35251 AC079416.3-201ENST00000624479 549 ntBASIC4.67□□□□□ -1.66
RFC1P35251 AC006065.6-201ENST00000625201 545 ntBASIC4.67□□□□□ -1.66
RFC1P35251 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.67□□□□□ -1.66
RFC1P35251 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
RFC1P35251 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFC1P35251 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFC1P35251 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RFC1P35251 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFC1P35251 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RFC1P35251 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
RFC1P35251 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFC1P35251 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RFC1P35251 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RFC1P35251 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.66□□□□□ -1.66
RFC1P35251 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.66□□□□□ -1.66
RFC1P35251 AC007529.1-201ENST00000418574 2178 ntBASIC4.66□□□□□ -1.66
RFC1P35251 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RFC1P35251 OR52B1P-201ENST00000316506 909 ntBASIC4.66□□□□□ -1.66
RFC1P35251 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RFC1P35251 RNA5SP307-201ENST00000362863 116 ntBASIC4.66□□□□□ -1.66
RFC1P35251 RNU1-130P-201ENST00000363930 160 ntBASIC4.66□□□□□ -1.66
RFC1P35251 RNA5SP505-201ENST00000364748 108 ntBASIC4.66□□□□□ -1.66
RFC1P35251 OR1L1-202ENST00000373686 1083 ntBASIC4.66□□□□□ -1.66
RFC1P35251 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RFC1P35251 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RFC1P35251 RPS16P5-201ENST00000406501 404 ntBASIC4.66□□□□□ -1.66
RFC1P35251 AL590084.1-201ENST00000407885 387 ntBASIC4.66□□□□□ -1.66
RFC1P35251 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.66□□□□□ -1.66
RFC1P35251 AL139095.3-201ENST00000419672 1203 ntBASIC4.66□□□□□ -1.66
RFC1P35251 AC069213.2-201ENST00000420238 366 ntBASIC4.66□□□□□ -1.66
RFC1P35251 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.66□□□□□ -1.66
RFC1P35251 OR5AW1P-201ENST00000426334 1006 ntBASIC4.66□□□□□ -1.66
RFC1P35251 RPEP2-201ENST00000432149 701 ntBASIC4.66□□□□□ -1.66
RFC1P35251 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.66□□□□□ -1.66
RFC1P35251 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.66□□□□□ -1.66
RFC1P35251 UBE2V1P3-201ENST00000439651 417 ntBASIC4.66□□□□□ -1.66
RFC1P35251 AL138878.2-201ENST00000440581 1241 ntBASIC4.66□□□□□ -1.66
RFC1P35251 FGF7P5-201ENST00000441829 291 ntBASIC4.66□□□□□ -1.66
RFC1P35251 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.66□□□□□ -1.66
RFC1P35251 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.66□□□□□ -1.66
RFC1P35251 MTND2P22-201ENST00000444325 1033 ntBASIC4.66□□□□□ -1.66
RFC1P35251 ARL2BPP10-201ENST00000446487 531 ntBASIC4.66□□□□□ -1.66
RFC1P35251 Z83846.1-201ENST00000446798 265 ntBASIC4.66□□□□□ -1.66
RFC1P35251 MRPL42P4-201ENST00000453267 443 ntBASIC4.66□□□□□ -1.66
RFC1P35251 AC005008.1-201ENST00000456151 612 ntBASIC4.66□□□□□ -1.66
RFC1P35251 RPL37P3-201ENST00000456825 293 ntBASIC4.66□□□□□ -1.66
RFC1P35251 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RFC1P35251 AC008897.1-201ENST00000494006 347 ntBASIC4.66□□□□□ -1.66
RFC1P35251 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.66□□□□□ -1.66
RFC1P35251 AC113347.3-201ENST00000509113 148 ntBASIC4.66□□□□□ -1.66
RFC1P35251 RNA5SP497-201ENST00000516081 97 ntBASIC4.66□□□□□ -1.66
RFC1P35251 AC023632.1-201ENST00000518463 375 ntBASIC4.66□□□□□ -1.66
RFC1P35251 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.66□□□□□ -1.66
RFC1P35251 IGKV2-36-201ENST00000519999 223 ntBASIC4.66□□□□□ -1.66
RFC1P35251 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.66□□□□□ -1.66
RFC1P35251 AC092747.2-201ENST00000545069 983 ntBASIC4.66□□□□□ -1.66
RFC1P35251 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.66□□□□□ -1.66
RFC1P35251 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms