RNA–Protein interactions for RNA: ENST00000434073.1

PCDH9-AS3-201, PCDH9 antisense RNA 3, humanhuman

TSL 2 BASIC

Gene PCDH9-AS3, Length 479 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-AS3-201ENST00000434073 AEBP2Q6ZN18 517 aaPredicted RBP25.29■■□□□ 1.64
PCDH9-AS3-201ENST00000434073 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
PCDH9-AS3-201ENST00000434073 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
PCDH9-AS3-201ENST00000434073 SENP3Q9H4L4 574 aaPredicted RBP21.49■■□□□ 1.03
PCDH9-AS3-201ENST00000434073 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
PCDH9-AS3-201ENST00000434073 FOXD1Q16676 465 aa19.92■□□□□ 0.78
PCDH9-AS3-201ENST00000434073 PPP6R1Q9UPN7 881 aa19.12■□□□□ 0.65
PCDH9-AS3-201ENST00000434073 ADRA2BP18089 450 aa19.08■□□□□ 0.64
PCDH9-AS3-201ENST00000434073 PIAS4Q8N2W9 510 aaPredicted RBP18.76■□□□□ 0.59
PCDH9-AS3-201ENST00000434073 MSH5O43196 834 aa18.42■□□□□ 0.54
PCDH9-AS3-201ENST00000434073 PPP4R3CPQ6ZMV5 832 aa17.6■□□□□ 0.41
PCDH9-AS3-201ENST00000434073 SCAF1Q9H7N4 1312 aaKnown RBP17.49■□□□□ 0.39
PCDH9-AS3-201ENST00000434073 MAPK8IP2Q13387 824 aaPredicted RBP17.31■□□□□ 0.36
PCDH9-AS3-201ENST00000434073 CNKSR2Q8WXI2 1034 aa17.15■□□□□ 0.34
PCDH9-AS3-201ENST00000434073 DMRT2Q9Y5R5 561 aa17.15■□□□□ 0.34
PCDH9-AS3-201ENST00000434073 KCNA4P22459 653 aa17.14■□□□□ 0.33
PCDH9-AS3-201ENST00000434073 NCBP3Q53F19 620 aaKnown RBP17.14■□□□□ 0.33
PCDH9-AS3-201ENST00000434073 NPM3O75607 178 aaKnown RBP16.89■□□□□ 0.29
PCDH9-AS3-201ENST00000434073 RNF216Q9NWF9 866 aaPredicted RBP16.84■□□□□ 0.29
PCDH9-AS3-201ENST00000434073 POTEDQ86YR6 584 aa16.82■□□□□ 0.28
PCDH9-AS3-201ENST00000434073 HOXD11P31277 338 aaPredicted RBP16.8■□□□□ 0.28
PCDH9-AS3-201ENST00000434073 DNAJC5BQ9UF47 199 aa16.54■□□□□ 0.24
PCDH9-AS3-201ENST00000434073 SLC4A1APQ9BWU0 796 aaKnown RBP16.31■□□□□ 0.2
PCDH9-AS3-201ENST00000434073 DCAF8L1A6NGE4 600 aa16.29■□□□□ 0.2
PCDH9-AS3-201ENST00000434073 SLC4A2P04920 1241 aa15.97■□□□□ 0.15
PCDH9-AS3-201ENST00000434073 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.92■□□□□ 0.14
PCDH9-AS3-201ENST00000434073 FOXD4L1Q9NU39 408 aa15.82■□□□□ 0.12
PCDH9-AS3-201ENST00000434073 ZBTB22O15209 634 aa15.79■□□□□ 0.12
PCDH9-AS3-201ENST00000434073 RNF39Q9H2S5 420 aa15.79■□□□□ 0.12
PCDH9-AS3-201ENST00000434073 EHMT2Q96KQ7 1210 aa15.74■□□□□ 0.11
PCDH9-AS3-201ENST00000434073 U3KPZ7 1027 aaPredicted RBP15.72■□□□□ 0.11
PCDH9-AS3-201ENST00000434073 CSRNP3Q8WYN3 585 aa15.65■□□□□ 0.1
PCDH9-AS3-201ENST00000434073 MYCNP04198 464 aaPredicted RBP15.63■□□□□ 0.09
PCDH9-AS3-201ENST00000434073 C1QBPQ07021 282 aaKnown RBP15.59■□□□□ 0.09
PCDH9-AS3-201ENST00000434073 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.51■□□□□ 0.07
PCDH9-AS3-201ENST00000434073 HNRNPUL2Q1KMD3 747 aaKnown RBP15.51■□□□□ 0.07
PCDH9-AS3-201ENST00000434073 SAMD1Q6SPF0 538 aaPredicted RBP15.45■□□□□ 0.06
PCDH9-AS3-201ENST00000434073 APLP2Q06481 763 aa15.37■□□□□ 0.05
PCDH9-AS3-201ENST00000434073 CACNB1Q02641 598 aaPredicted RBP15.33■□□□□ 0.04
PCDH9-AS3-201ENST00000434073 ATXN8OSP0DMR3 200 aa15.31■□□□□ 0.04
PCDH9-AS3-201ENST00000434073 SPINK5Q9NQ38 1064 aaPredicted RBP15.25■□□□□ 0.03
PCDH9-AS3-201ENST00000434073 ATF5Q9Y2D1 282 aaPredicted RBP15.18■□□□□ 0.02
PCDH9-AS3-201ENST00000434073 CAPN15O75808 1086 aa15.17■□□□□ 0.02
PCDH9-AS3-201ENST00000434073 ZNF219Q9P2Y4 722 aaPredicted RBP15.16■□□□□ 0.02
PCDH9-AS3-201ENST00000434073 TRHP20396 242 aaPredicted RBP15.08■□□□□ 0
PCDH9-AS3-201ENST00000434073 DSG3P32926 999 aa14.98□□□□□ -0.01
PCDH9-AS3-201ENST00000434073 ABCB7O75027 752 aa14.87□□□□□ -0.03
PCDH9-AS3-201ENST00000434073 POLA2Q14181 598 aa14.85□□□□□ -0.03
PCDH9-AS3-201ENST00000434073 ZBTB12Q9Y330 459 aaPredicted RBP14.67□□□□□ -0.06
PCDH9-AS3-201ENST00000434073 FBLN2P98095 1184 aa14.54□□□□□ -0.08
PCDH9-AS3-201ENST00000434073 MKRN4PQ13434 485 aaPredicted RBP14.54□□□□□ -0.08
PCDH9-AS3-201ENST00000434073 OSCARQ8IYS5 282 aa14.37□□□□□ -0.11
PCDH9-AS3-201ENST00000434073 RBM42Q9BTD8 480 aaKnown RBP14.3□□□□□ -0.12
PCDH9-AS3-201ENST00000434073 SPDYE2BA6NHP3 402 aa14.26□□□□□ -0.13
PCDH9-AS3-201ENST00000434073 SPDYE6P0CI01 402 aa14.26□□□□□ -0.13
PCDH9-AS3-201ENST00000434073 SPDYE2Q495Y8 402 aa14.26□□□□□ -0.13
PCDH9-AS3-201ENST00000434073 SPDYE4A6NLX3 237 aa14.17□□□□□ -0.14
PCDH9-AS3-201ENST00000434073 SSUH2Q9Y2M2 353 aa14.17□□□□□ -0.14
PCDH9-AS3-201ENST00000434073 ZNF692Q9BU19 519 aaPredicted RBP14.15□□□□□ -0.14
PCDH9-AS3-201ENST00000434073 FKBP8Q14318 412 aa14.12□□□□□ -0.15
PCDH9-AS3-201ENST00000434073 AKT1S1Q96B36 256 aa14.1□□□□□ -0.15
PCDH9-AS3-201ENST00000434073 PROM2Q8N271 834 aa14.02□□□□□ -0.17
PCDH9-AS3-201ENST00000434073 PABPN1Q86U42 306 aaKnown RBP eCLIP13.96□□□□□ -0.17
PCDH9-AS3-201ENST00000434073 REM2Q8IYK8 340 aaPredicted RBP13.94□□□□□ -0.18
PCDH9-AS3-201ENST00000434073 SPDYE1Q8NFV5 336 aaPredicted RBP13.82□□□□□ -0.2
PCDH9-AS3-201ENST00000434073 PITPNM1O00562 1244 aa13.79□□□□□ -0.2
PCDH9-AS3-201ENST00000434073 STAG3Q9UJ98 1225 aa13.75□□□□□ -0.21
PCDH9-AS3-201ENST00000434073 CHRDL2Q6WN34 429 aa13.69□□□□□ -0.22
PCDH9-AS3-201ENST00000434073 CLEC11AQ9Y240 323 aa13.69□□□□□ -0.22
PCDH9-AS3-201ENST00000434073 FBXO3Q9UK99 471 aa13.67□□□□□ -0.22
PCDH9-AS3-201ENST00000434073 PRR29P0C7W0 189 aa13.6□□□□□ -0.23
PCDH9-AS3-201ENST00000434073 FXR2P51116 673 aaKnown RBP eCLIP13.57□□□□□ -0.24
PCDH9-AS3-201ENST00000434073 PIP4P2Q8N4L2 257 aa13.51□□□□□ -0.25
PCDH9-AS3-201ENST00000434073 VASPP50552 380 aaPredicted RBP13.48□□□□□ -0.25
PCDH9-AS3-201ENST00000434073 CREBZFQ9NS37 354 aa13.46□□□□□ -0.25
PCDH9-AS3-201ENST00000434073 PRKAR2AP13861 404 aaKnown RBP13.42□□□□□ -0.26
PCDH9-AS3-201ENST00000434073 CHADLQ6NUI6 762 aa13.39□□□□□ -0.27
PCDH9-AS3-201ENST00000434073 MIER1Q8N108 512 aa13.39□□□□□ -0.27
PCDH9-AS3-201ENST00000434073 PLCD3Q8N3E9 789 aa13.38□□□□□ -0.27
PCDH9-AS3-201ENST00000434073 PLEKHG5O94827 1062 aa13.36□□□□□ -0.27
PCDH9-AS3-201ENST00000434073 MNX1P50219 401 aaPredicted RBP13.34□□□□□ -0.27
PCDH9-AS3-201ENST00000434073 POTEHQ6S545 545 aa13.31□□□□□ -0.28
PCDH9-AS3-201ENST00000434073 ZBTB47Q9UFB7 747 aaPredicted RBP13.3□□□□□ -0.28
PCDH9-AS3-201ENST00000434073 FARP1Q9Y4F1 1045 aaPredicted RBP13.3□□□□□ -0.28
PCDH9-AS3-201ENST00000434073 IFNLR1Q8IU57 520 aaPredicted RBP13.29□□□□□ -0.28
PCDH9-AS3-201ENST00000434073 NPM1P06748 294 aaKnown RBP eCLIP13.22□□□□□ -0.29
PCDH9-AS3-201ENST00000434073 KLHL34Q8N239 644 aa13.19□□□□□ -0.3
PCDH9-AS3-201ENST00000434073 SPOCK2Q92563 424 aa13.13□□□□□ -0.31
PCDH9-AS3-201ENST00000434073 NUBP1P53384 320 aa13.12□□□□□ -0.31
PCDH9-AS3-201ENST00000434073 C19orf67A6NJJ6 358 aa13.1□□□□□ -0.31
PCDH9-AS3-201ENST00000434073 RASEFQ8IZ41 740 aa13.07□□□□□ -0.32
PCDH9-AS3-201ENST00000434073 CD44P16070 742 aaKnown RBP13.04□□□□□ -0.32
PCDH9-AS3-201ENST00000434073 HAX1O00165 279 aa13.03□□□□□ -0.32
PCDH9-AS3-201ENST00000434073 FAM212AQ96EL1 285 aa13.01□□□□□ -0.33
PCDH9-AS3-201ENST00000434073 PAK3O75914 559 aaPredicted RBP12.99□□□□□ -0.33
PCDH9-AS3-201ENST00000434073 GSE1Q14687 1217 aa12.96□□□□□ -0.33
PCDH9-AS3-201ENST00000434073 EVX2Q03828 476 aa12.95□□□□□ -0.34
PCDH9-AS3-201ENST00000434073 TSPYL2Q9H2G4 693 aaPredicted RBP12.95□□□□□ -0.34
PCDH9-AS3-201ENST00000434073 ZRANB1Q9UGI0 708 aa12.94□□□□□ -0.34
PCDH9-AS3-201ENST00000434073 CCDC61Q9Y6R9 512 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms