Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 AC015795.1-201ENST00000513669 327 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 OR5BC1P-201ENST00000529327 739 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 MTATP6P3-201ENST00000581686 676 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AP001269.3-201ENST00000588718 329 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AL031985.2-201ENST00000600955 480 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AC008745.1-201ENST00000604064 271 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 WT1-AS_8.1-201ENST00000615200 275 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AC091965.5-201ENST00000624785 342 ntBASIC5.35□□□□□ -1.55
SALL3Q9BXA9 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SALL3Q9BXA9 AP000526.1-201ENST00000603308 1388 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 AC104446.1-201ENST00000613728 1321 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 MIR331-201ENST00000362302 94 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 SNORD66.1-201ENST00000391230 76 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 RPS4XP9-201ENST00000405151 780 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 RPL21P108-201ENST00000413857 481 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 RAD23BP2-201ENST00000416003 1207 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 RPL23AP52-201ENST00000439311 478 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 MTCYBP42-201ENST00000444653 1130 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 AL360221.1-201ENST00000445989 335 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 NPM1P49-201ENST00000448027 714 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 VN1R32P-201ENST00000452234 905 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 NIP7P2-201ENST00000485801 544 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 NAA50-206ENST00000493454 964 ntTSL 2 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 AC109927.2-201ENST00000506416 303 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 ATP1B1P1-201ENST00000509767 915 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 FABP5P12-201ENST00000515543 389 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 RN7SKP92-201ENST00000517266 244 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 FAM106CP-201ENST00000582212 507 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 MIR5096-201ENST00000583713 70 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 AC015688.2-201ENST00000584523 262 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 RBM11P1-201ENST00000604951 799 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 AC013468.1-201ENST00000608680 598 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 AC005332.10-201ENST00000612725 619 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 AC122133.1-201ENST00000613964 233 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 AP003072.4-201ENST00000624580 310 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 AC090582.1-201ENST00000636321 199 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 TTC39DP-201ENST00000416781 1688 ntBASIC5.34□□□□□ -1.55
SALL3Q9BXA9 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC5.34□□□□□ -1.55
SALL3Q9BXA9 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SALL3Q9BXA9 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.34□□□□□ -1.56
SALL3Q9BXA9 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AL606537.1-201ENST00000607258 2011 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AC067945.1-201ENST00000342609 618 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 Y_RNA.604-201ENST00000410574 102 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 MTCO1P21-201ENST00000416634 589 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 Z75741.2-201ENST00000417272 1167 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 PDSS1P1-201ENST00000422953 1114 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 COX7BP2-201ENST00000437976 242 ntBASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC5.33□□□□□ -1.56
SALL3Q9BXA9 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms