Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RIF1Q5UIP0 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
RIF1Q5UIP0 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
RIF1Q5UIP0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RIF1Q5UIP0 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 AL353705.1-201ENST00000433468 480 ntBASIC3.38□□□□□ -1.87
RIF1Q5UIP0 AC021678.1-201ENST00000505195 936 ntBASIC3.38□□□□□ -1.87
RIF1Q5UIP0 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.38□□□□□ -1.87
RIF1Q5UIP0 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 RNU11-201ENST00000387069 134 ntBASIC3.38□□□□□ -1.87
RIF1Q5UIP0 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 AL135938.1-201ENST00000443141 297 ntBASIC3.38□□□□□ -1.87
RIF1Q5UIP0 EEF1B2P7-201ENST00000451177 676 ntBASIC3.38□□□□□ -1.87
RIF1Q5UIP0 AL109933.2-201ENST00000452651 260 ntBASIC3.38□□□□□ -1.87
RIF1Q5UIP0 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 AL360012.1-201ENST00000602813 131 ntBASIC3.38□□□□□ -1.87
RIF1Q5UIP0 AC073657.2-201ENST00000605661 303 ntBASIC3.38□□□□□ -1.87
RIF1Q5UIP0 AC234782.5-201ENST00000617723 324 ntBASIC3.38□□□□□ -1.87
RIF1Q5UIP0 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
RIF1Q5UIP0 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RIF1Q5UIP0 snoU13.26-201ENST00000459452 105 ntBASIC3.37□□□□□ -1.87
RIF1Q5UIP0 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.37□□□□□ -1.87
RIF1Q5UIP0 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.37□□□□□ -1.87
RIF1Q5UIP0 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RIF1Q5UIP0 HIGD1AP1-201ENST00000550979 275 ntBASIC3.37□□□□□ -1.87
RIF1Q5UIP0 AC007599.1-201ENST00000568688 1174 ntBASIC3.37□□□□□ -1.87
RIF1Q5UIP0 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.37□□□□□ -1.87
RIF1Q5UIP0 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.37□□□□□ -1.87
RIF1Q5UIP0 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.37□□□□□ -1.87
RIF1Q5UIP0 AL137918.1-201ENST00000624542 1922 ntBASIC3.37□□□□□ -1.87
RIF1Q5UIP0 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RIF1Q5UIP0 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.37□□□□□ -1.87
RIF1Q5UIP0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC3.37□□□□□ -1.87
RIF1Q5UIP0 RPL35AP12-201ENST00000425362 338 ntBASIC3.37□□□□□ -1.87
RIF1Q5UIP0 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.37□□□□□ -1.87
RIF1Q5UIP0 NPM1P39-201ENST00000449818 867 ntBASIC3.37□□□□□ -1.87
RIF1Q5UIP0 AC108022.1-201ENST00000493466 478 ntBASIC3.37□□□□□ -1.87
RIF1Q5UIP0 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.37□□□□□ -1.87
RIF1Q5UIP0 AC018442.3-201ENST00000523025 183 ntBASIC3.37□□□□□ -1.87
RIF1Q5UIP0 AC124312.4-201ENST00000605533 310 ntBASIC3.37□□□□□ -1.87
RIF1Q5UIP0 RNVU1-4-201ENST00000612985 164 ntBASIC3.37□□□□□ -1.87
RIF1Q5UIP0 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RIF1Q5UIP0 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RIF1Q5UIP0 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 AC108734.1-201ENST00000439549 399 ntBASIC3.36□□□□□ -1.87
RIF1Q5UIP0 AL513124.1-201ENST00000450410 614 ntBASIC3.36□□□□□ -1.87
RIF1Q5UIP0 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 RPL31P61-201ENST00000496160 376 ntBASIC3.36□□□□□ -1.87
RIF1Q5UIP0 AC008885.1-201ENST00000514930 301 ntBASIC3.36□□□□□ -1.87
RIF1Q5UIP0 RNU6-579P-201ENST00000516879 102 ntBASIC3.36□□□□□ -1.87
RIF1Q5UIP0 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 AP002404.1-201ENST00000532005 451 ntBASIC3.36□□□□□ -1.87
RIF1Q5UIP0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 HIGD1AP12-201ENST00000427832 281 ntBASIC3.36□□□□□ -1.87
RIF1Q5UIP0 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 AL157385.1-201ENST00000446973 268 ntBASIC3.36□□□□□ -1.87
RIF1Q5UIP0 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 RPS3AP43-201ENST00000479743 781 ntBASIC3.36□□□□□ -1.87
RIF1Q5UIP0 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 AC127024.5-201ENST00000580085 462 ntBASIC3.36□□□□□ -1.87
RIF1Q5UIP0 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RIF1Q5UIP0 RNA5SP424-201ENST00000390988 115 ntBASIC3.35□□□□□ -1.87
RIF1Q5UIP0 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms