Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 AC010435.1-201ENST00000623353 1177 ntBASIC3.37□□□□□ -1.87
USF2Q15853 AC019278.1-201ENST00000623516 479 ntBASIC3.37□□□□□ -1.87
USF2Q15853 AC119674.1-220ENST00000641502 1048 ntBASIC3.37□□□□□ -1.87
USF2Q15853 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
USF2Q15853 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.37□□□□□ -1.87
USF2Q15853 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.37□□□□□ -1.87
USF2Q15853 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
USF2Q15853 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
USF2Q15853 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USF2Q15853 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
USF2Q15853 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
USF2Q15853 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.36□□□□□ -1.87
USF2Q15853 AC012618.3-205ENST00000637896 1496 ntBASIC3.36□□□□□ -1.87
USF2Q15853 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USF2Q15853 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.36□□□□□ -1.87
USF2Q15853 XPOTP1-201ENST00000443317 2398 ntBASIC3.36□□□□□ -1.87
USF2Q15853 NCAPGP1-201ENST00000505112 1814 ntBASIC3.36□□□□□ -1.87
USF2Q15853 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
USF2Q15853 RNU1-130P-201ENST00000363930 160 ntBASIC3.36□□□□□ -1.87
USF2Q15853 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.36□□□□□ -1.87
USF2Q15853 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.36□□□□□ -1.87
USF2Q15853 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
USF2Q15853 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
USF2Q15853 AC097374.1-203ENST00000400783 485 ntBASIC3.36□□□□□ -1.87
USF2Q15853 RNU2-71P-201ENST00000411395 189 ntBASIC3.36□□□□□ -1.87
USF2Q15853 AL513174.1-201ENST00000423182 629 ntBASIC3.36□□□□□ -1.87
USF2Q15853 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.36□□□□□ -1.87
USF2Q15853 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.36□□□□□ -1.87
USF2Q15853 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.36□□□□□ -1.87
USF2Q15853 RPL7P52-201ENST00000449200 742 ntBASIC3.36□□□□□ -1.87
USF2Q15853 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.36□□□□□ -1.87
USF2Q15853 RN7SL585P-201ENST00000470538 280 ntBASIC3.36□□□□□ -1.87
USF2Q15853 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.36□□□□□ -1.87
USF2Q15853 AC093267.1-201ENST00000489176 961 ntBASIC3.36□□□□□ -1.87
USF2Q15853 RN7SL812P-201ENST00000493791 279 ntBASIC3.36□□□□□ -1.87
USF2Q15853 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.36□□□□□ -1.87
USF2Q15853 ATP1B1P1-201ENST00000509767 915 ntBASIC3.36□□□□□ -1.87
USF2Q15853 SNORA70.17-201ENST00000516449 133 ntBASIC3.36□□□□□ -1.87
USF2Q15853 AF279873.1-201ENST00000523393 313 ntBASIC3.36□□□□□ -1.87
USF2Q15853 AP000827.1-201ENST00000527814 258 ntBASIC3.36□□□□□ -1.87
USF2Q15853 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.36□□□□□ -1.87
USF2Q15853 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.36□□□□□ -1.87
USF2Q15853 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.36□□□□□ -1.87
USF2Q15853 AP001160.4-201ENST00000596971 382 ntBASIC3.36□□□□□ -1.87
USF2Q15853 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.36□□□□□ -1.87
USF2Q15853 AC068790.7-201ENST00000602347 528 ntBASIC3.36□□□□□ -1.87
USF2Q15853 AC073111.2-201ENST00000605657 1075 ntBASIC3.36□□□□□ -1.87
USF2Q15853 AL161616.1-201ENST00000611867 286 ntBASIC3.36□□□□□ -1.87
USF2Q15853 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
USF2Q15853 SNORA50A-202ENST00000629536 136 ntBASIC3.36□□□□□ -1.87
USF2Q15853 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.36□□□□□ -1.87
USF2Q15853 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.36□□□□□ -1.87
USF2Q15853 FP325313.1-201ENST00000638228 703 ntBASIC3.36□□□□□ -1.87
USF2Q15853 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USF2Q15853 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USF2Q15853 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
USF2Q15853 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
USF2Q15853 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
USF2Q15853 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
USF2Q15853 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
USF2Q15853 MTND4P34-201ENST00000572715 1371 ntBASIC3.36□□□□□ -1.87
USF2Q15853 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.36□□□□□ -1.87
USF2Q15853 AC006504.1-201ENST00000562493 3666 ntBASIC3.35□□□□□ -1.87
USF2Q15853 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USF2Q15853 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
USF2Q15853 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USF2Q15853 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.35□□□□□ -1.87
USF2Q15853 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
USF2Q15853 AC008033.1-201ENST00000216407 1162 ntBASIC3.35□□□□□ -1.87
USF2Q15853 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USF2Q15853 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
USF2Q15853 MIR3065-201ENST00000390137 79 ntBASIC3.35□□□□□ -1.87
USF2Q15853 SNORD66.1-201ENST00000391230 76 ntBASIC3.35□□□□□ -1.87
USF2Q15853 SNORA48.8-201ENST00000391324 134 ntBASIC3.35□□□□□ -1.87
USF2Q15853 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.35□□□□□ -1.87
USF2Q15853 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.35□□□□□ -1.87
USF2Q15853 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.35□□□□□ -1.87
USF2Q15853 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.35□□□□□ -1.87
USF2Q15853 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.35□□□□□ -1.87
USF2Q15853 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
USF2Q15853 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.35□□□□□ -1.87
USF2Q15853 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.35□□□□□ -1.87
USF2Q15853 AC069540.1-201ENST00000446320 988 ntBASIC3.35□□□□□ -1.87
USF2Q15853 SSXP4-201ENST00000451349 245 ntBASIC3.35□□□□□ -1.87
USF2Q15853 NECAP1P2-201ENST00000455668 727 ntBASIC3.35□□□□□ -1.87
USF2Q15853 RPL21P104-201ENST00000464143 478 ntBASIC3.35□□□□□ -1.87
USF2Q15853 AC053481.1-201ENST00000467217 306 ntBASIC3.35□□□□□ -1.87
USF2Q15853 RPL35AP15-201ENST00000468042 339 ntBASIC3.35□□□□□ -1.87
USF2Q15853 RPL21P126-201ENST00000470049 478 ntBASIC3.35□□□□□ -1.87
USF2Q15853 AP000893.1-201ENST00000474462 794 ntBASIC3.35□□□□□ -1.87
USF2Q15853 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.35□□□□□ -1.87
USF2Q15853 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.35□□□□□ -1.87
USF2Q15853 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC3.35□□□□□ -1.87
USF2Q15853 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.35□□□□□ -1.87
USF2Q15853 AC002456.2-201ENST00000509356 380 ntBASIC3.35□□□□□ -1.87
USF2Q15853 AC008494.2-201ENST00000514544 370 ntBASIC3.35□□□□□ -1.87
USF2Q15853 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.35□□□□□ -1.87
USF2Q15853 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.35□□□□□ -1.87
USF2Q15853 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.35□□□□□ -1.87
USF2Q15853 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms