RNA–Protein interactions for RNA: ENST00000524942.1

AP003733.3-201, humanhuman

TSL 2 BASIC

Gene AP003733.3, Length 788 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003733.3-201ENST00000524942 AEBP2Q6ZN18 517 aaPredicted RBP25.38■■□□□ 1.65
AP003733.3-201ENST00000524942 CHIC1Q5VXU3 224 aa24.26■■□□□ 1.47
AP003733.3-201ENST00000524942 SENP3Q9H4L4 574 aaPredicted RBP21.66■■□□□ 1.06
AP003733.3-201ENST00000524942 PHF23Q9BUL5 403 aaPredicted RBP21.38■■□□□ 1.01
AP003733.3-201ENST00000524942 FOXD1Q16676 465 aa20.14■□□□□ 0.81
AP003733.3-201ENST00000524942 PLPPR3Q6T4P5 718 aa19.47■□□□□ 0.71
AP003733.3-201ENST00000524942 PPP6R1Q9UPN7 881 aa18.94■□□□□ 0.62
AP003733.3-201ENST00000524942 ADRA2BP18089 450 aa18.88■□□□□ 0.61
AP003733.3-201ENST00000524942 PIAS4Q8N2W9 510 aaPredicted RBP18.86■□□□□ 0.61
AP003733.3-201ENST00000524942 MSH5O43196 834 aa18.83■□□□□ 0.6
AP003733.3-201ENST00000524942 POTEDQ86YR6 584 aa18.09■□□□□ 0.49
AP003733.3-201ENST00000524942 SCAF1Q9H7N4 1312 aaKnown RBP17.32■□□□□ 0.36
AP003733.3-201ENST00000524942 MAPK8IP2Q13387 824 aaPredicted RBP17.29■□□□□ 0.36
AP003733.3-201ENST00000524942 DMRT2Q9Y5R5 561 aa17.19■□□□□ 0.34
AP003733.3-201ENST00000524942 PPP4R3CPQ6ZMV5 832 aa17.06■□□□□ 0.32
AP003733.3-201ENST00000524942 CNKSR2Q8WXI2 1034 aa16.72■□□□□ 0.27
AP003733.3-201ENST00000524942 HOXD11P31277 338 aaPredicted RBP16.63■□□□□ 0.25
AP003733.3-201ENST00000524942 RNF216Q9NWF9 866 aaPredicted RBP16.55■□□□□ 0.24
AP003733.3-201ENST00000524942 NCBP3Q53F19 620 aaKnown RBP16.46■□□□□ 0.23
AP003733.3-201ENST00000524942 DCAF8L1A6NGE4 600 aa16.43■□□□□ 0.22
AP003733.3-201ENST00000524942 NPM3O75607 178 aaKnown RBP16.21■□□□□ 0.19
AP003733.3-201ENST00000524942 RNF39Q9H2S5 420 aa16.08■□□□□ 0.16
AP003733.3-201ENST00000524942 DNAJC5BQ9UF47 199 aa16.07■□□□□ 0.16
AP003733.3-201ENST00000524942 CACNB1Q02641 598 aaPredicted RBP16.03■□□□□ 0.16
AP003733.3-201ENST00000524942 KCNA4P22459 653 aa16.02■□□□□ 0.16
AP003733.3-201ENST00000524942 C1QBPQ07021 282 aaKnown RBP15.86■□□□□ 0.13
AP003733.3-201ENST00000524942 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.81■□□□□ 0.12
AP003733.3-201ENST00000524942 U3KPZ7 1027 aaPredicted RBP15.51■□□□□ 0.07
AP003733.3-201ENST00000524942 SLC4A2P04920 1241 aa15.45■□□□□ 0.06
AP003733.3-201ENST00000524942 SPINK5Q9NQ38 1064 aaPredicted RBP15.22■□□□□ 0.03
AP003733.3-201ENST00000524942 CAPN15O75808 1086 aa15.19■□□□□ 0.02
AP003733.3-201ENST00000524942 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.15■□□□□ 0.02
AP003733.3-201ENST00000524942 HNRNPUL2Q1KMD3 747 aaKnown RBP15.15■□□□□ 0.02
AP003733.3-201ENST00000524942 SLC4A1APQ9BWU0 796 aaKnown RBP15.15■□□□□ 0.02
AP003733.3-201ENST00000524942 APLP2Q06481 763 aa15.11■□□□□ 0.01
AP003733.3-201ENST00000524942 DSG3P32926 999 aa15.09■□□□□ 0.01
AP003733.3-201ENST00000524942 SAMD1Q6SPF0 538 aaPredicted RBP15.06■□□□□ 0
AP003733.3-201ENST00000524942 MYCNP04198 464 aaPredicted RBP15.01□□□□□ -0.01
AP003733.3-201ENST00000524942 ZNF219Q9P2Y4 722 aaPredicted RBP15□□□□□ -0.01
AP003733.3-201ENST00000524942 TRHP20396 242 aaPredicted RBP14.97□□□□□ -0.01
AP003733.3-201ENST00000524942 FOXD4L1Q9NU39 408 aa14.92□□□□□ -0.02
AP003733.3-201ENST00000524942 ABCB7O75027 752 aa14.83□□□□□ -0.04
AP003733.3-201ENST00000524942 ZBTB22O15209 634 aa14.74□□□□□ -0.05
AP003733.3-201ENST00000524942 POLA2Q14181 598 aa14.63□□□□□ -0.07
AP003733.3-201ENST00000524942 ATF5Q9Y2D1 282 aaPredicted RBP14.62□□□□□ -0.07
AP003733.3-201ENST00000524942 ATXN8OSP0DMR3 200 aa14.48□□□□□ -0.09
AP003733.3-201ENST00000524942 RBM42Q9BTD8 480 aaKnown RBP14.42□□□□□ -0.1
AP003733.3-201ENST00000524942 ZBTB12Q9Y330 459 aaPredicted RBP14.38□□□□□ -0.11
AP003733.3-201ENST00000524942 POTEHQ6S545 545 aa14.22□□□□□ -0.13
AP003733.3-201ENST00000524942 CSRNP3Q8WYN3 585 aa14.19□□□□□ -0.14
AP003733.3-201ENST00000524942 OSCARQ8IYS5 282 aa14.14□□□□□ -0.15
AP003733.3-201ENST00000524942 AKT1S1Q96B36 256 aa14.1□□□□□ -0.15
AP003733.3-201ENST00000524942 FBLN2P98095 1184 aa14.06□□□□□ -0.16
AP003733.3-201ENST00000524942 EHMT2Q96KQ7 1210 aa14.06□□□□□ -0.16
AP003733.3-201ENST00000524942 CHRDL2Q6WN34 429 aa14.03□□□□□ -0.16
AP003733.3-201ENST00000524942 MKRN4PQ13434 485 aaPredicted RBP13.97□□□□□ -0.17
AP003733.3-201ENST00000524942 REM2Q8IYK8 340 aaPredicted RBP13.96□□□□□ -0.17
AP003733.3-201ENST00000524942 SPDYE2BA6NHP3 402 aa13.93□□□□□ -0.18
AP003733.3-201ENST00000524942 SPDYE6P0CI01 402 aa13.93□□□□□ -0.18
AP003733.3-201ENST00000524942 SPDYE2Q495Y8 402 aa13.93□□□□□ -0.18
AP003733.3-201ENST00000524942 PITPNM1O00562 1244 aa13.8□□□□□ -0.2
AP003733.3-201ENST00000524942 ZNF692Q9BU19 519 aaPredicted RBP13.77□□□□□ -0.21
AP003733.3-201ENST00000524942 SSUH2Q9Y2M2 353 aa13.76□□□□□ -0.21
AP003733.3-201ENST00000524942 PIP4P2Q8N4L2 257 aa13.71□□□□□ -0.21
AP003733.3-201ENST00000524942 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.22
AP003733.3-201ENST00000524942 SPDYE1Q8NFV5 336 aaPredicted RBP13.65□□□□□ -0.22
AP003733.3-201ENST00000524942 CLEC11AQ9Y240 323 aa13.58□□□□□ -0.24
AP003733.3-201ENST00000524942 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
AP003733.3-201ENST00000524942 PRKAR2AP13861 404 aaKnown RBP13.44□□□□□ -0.26
AP003733.3-201ENST00000524942 HAX1O00165 279 aa13.42□□□□□ -0.26
AP003733.3-201ENST00000524942 PRR29P0C7W0 189 aa13.4□□□□□ -0.26
AP003733.3-201ENST00000524942 SP7Q8TDD2 431 aaPredicted RBP13.4□□□□□ -0.26
AP003733.3-201ENST00000524942 SPDYE4A6NLX3 237 aa13.39□□□□□ -0.27
AP003733.3-201ENST00000524942 CHADLQ6NUI6 762 aa13.3□□□□□ -0.28
AP003733.3-201ENST00000524942 EVX2Q03828 476 aa13.25□□□□□ -0.29
AP003733.3-201ENST00000524942 STAG3Q9UJ98 1225 aa13.25□□□□□ -0.29
AP003733.3-201ENST00000524942 C19orf67A6NJJ6 358 aa13.22□□□□□ -0.29
AP003733.3-201ENST00000524942 FARP1Q9Y4F1 1045 aaPredicted RBP13.15□□□□□ -0.3
AP003733.3-201ENST00000524942 PROM2Q8N271 834 aa13.12□□□□□ -0.31
AP003733.3-201ENST00000524942 CREBZFQ9NS37 354 aa13.1□□□□□ -0.31
AP003733.3-201ENST00000524942 CD44P16070 742 aaKnown RBP13.03□□□□□ -0.32
AP003733.3-201ENST00000524942 GABBR2O75899 941 aa12.98□□□□□ -0.33
AP003733.3-201ENST00000524942 MNX1P50219 401 aaPredicted RBP12.92□□□□□ -0.34
AP003733.3-201ENST00000524942 CLCN6P51797 869 aa12.89□□□□□ -0.35
AP003733.3-201ENST00000524942 NPM1P06748 294 aaKnown RBP eCLIP12.88□□□□□ -0.35
AP003733.3-201ENST00000524942 ZRANB1Q9UGI0 708 aa12.86□□□□□ -0.35
AP003733.3-201ENST00000524942 FKBP8Q14318 412 aa12.85□□□□□ -0.35
AP003733.3-201ENST00000524942 ZNF579Q8NAF0 562 aaKnown RBP12.85□□□□□ -0.35
AP003733.3-201ENST00000524942 PAK3O75914 559 aaPredicted RBP12.81□□□□□ -0.36
AP003733.3-201ENST00000524942 MIER1Q8N108 512 aa12.75□□□□□ -0.37
AP003733.3-201ENST00000524942 PLEKHG5O94827 1062 aa12.74□□□□□ -0.37
AP003733.3-201ENST00000524942 POTEIP0CG38 1075 aa12.7□□□□□ -0.38
AP003733.3-201ENST00000524942 PHF12Q96QT6 1004 aa12.68□□□□□ -0.38
AP003733.3-201ENST00000524942 GALR2O43603 387 aaPredicted RBP12.66□□□□□ -0.38
AP003733.3-201ENST00000524942 PLCD3Q8N3E9 789 aa12.66□□□□□ -0.38
AP003733.3-201ENST00000524942 DCBLD2Q96PD2 775 aa12.66□□□□□ -0.38
AP003733.3-201ENST00000524942 TSPYL2Q9H2G4 693 aaPredicted RBP12.62□□□□□ -0.39
AP003733.3-201ENST00000524942 ZBTB47Q9UFB7 747 aaPredicted RBP12.6□□□□□ -0.39
AP003733.3-201ENST00000524942 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
AP003733.3-201ENST00000524942 CCDC61Q9Y6R9 512 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms