Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AL122125.1-201ENST00000616999 600 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AL713922.2-201ENST00000619384 716 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 uc_338.22-201ENST00000622722 187 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 AC061999.1-201ENST00000624454 177 ntBASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC01646-202ENST00000634256 1107 ntTSL 5 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PCDHGA11Q9Y5H2 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 DOCK11P1-201ENST00000553480 5932 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 RBPJP6-201ENST00000411556 1431 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 DHX40P1-201ENST00000588725 1412 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC027088.4-201ENST00000611559 1947 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC011455.2-201ENST00000599320 3336 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AL139276.1-201ENST00000311910 1001 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 RN7SKP191-201ENST00000364713 306 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 RNU6-641P-201ENST00000384006 107 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 RNU6-907P-201ENST00000390924 102 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 SSXP10-201ENST00000402595 565 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AL023284.3-201ENST00000407767 334 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 MIR548F5-201ENST00000408421 86 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 RNA5SP345-201ENST00000410646 108 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 RNU4-14P-201ENST00000410858 122 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC113618.1-201ENST00000416747 285 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 CYCSP52-201ENST00000422857 310 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC009965.2-201ENST00000425328 970 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 RPS10P14-201ENST00000440748 502 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC104073.1-201ENST00000451988 151 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AL354710.1-201ENST00000453641 246 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 PFN1P6-201ENST00000476786 399 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 RNU7-51P-201ENST00000516560 62 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 RN7SKP99-201ENST00000517028 307 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 MTND4P7-201ENST00000523876 130 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 APOOP3-201ENST00000536787 586 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC027796.1-201ENST00000575593 512 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 MIR4675-201ENST00000577898 77 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 MIR378H-201ENST00000579966 83 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AL078624.2-201ENST00000605063 554 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC099494.2-201ENST00000623371 978 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC244517.12-201ENST00000623581 663 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 TTK-211ENST00000627129 240 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC027559.1-201ENST00000636288 271 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 THAP12P4-201ENST00000528321 2266 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC007823.1-201ENST00000569932 1566 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 AC092079.1-201ENST00000558620 1985 ntBASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PCDHGA11Q9Y5H2 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 MSL3P1-202ENST00000440028 1468 ntBASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
PCDHGA11Q9Y5H2 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms