Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ABCA3Q99758 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ABCA3Q99758 GSTM3P2-201ENST00000412746 530 ntBASIC4.62□□□□□ -1.67
ABCA3Q99758 ARL4AP1-201ENST00000503220 705 ntBASIC4.62□□□□□ -1.67
ABCA3Q99758 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.62□□□□□ -1.67
ABCA3Q99758 OR7A8P-201ENST00000595427 913 ntBASIC4.62□□□□□ -1.67
ABCA3Q99758 AC013412.1-201ENST00000610687 192 ntBASIC4.62□□□□□ -1.67
ABCA3Q99758 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
ABCA3Q99758 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ABCA3Q99758 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.62□□□□□ -1.67
ABCA3Q99758 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
ABCA3Q99758 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ABCA3Q99758 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.61□□□□□ -1.67
ABCA3Q99758 HCFC2P1-201ENST00000392864 1592 ntBASIC4.61□□□□□ -1.67
ABCA3Q99758 RSL24D1P1-201ENST00000404972 493 ntBASIC4.61□□□□□ -1.67
ABCA3Q99758 RNA5SP146-201ENST00000410743 123 ntBASIC4.61□□□□□ -1.67
ABCA3Q99758 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.61□□□□□ -1.67
ABCA3Q99758 AC093698.1-201ENST00000423843 571 ntBASIC4.61□□□□□ -1.67
ABCA3Q99758 OR5AW1P-201ENST00000426334 1006 ntBASIC4.61□□□□□ -1.67
ABCA3Q99758 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.61□□□□□ -1.67
ABCA3Q99758 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.61□□□□□ -1.67
ABCA3Q99758 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.61□□□□□ -1.67
ABCA3Q99758 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.61□□□□□ -1.67
ABCA3Q99758 BMS1P21-201ENST00000634565 365 ntBASIC4.61□□□□□ -1.67
ABCA3Q99758 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ABCA3Q99758 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.61□□□□□ -1.67
ABCA3Q99758 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ABCA3Q99758 SMG1P4-204ENST00000523028 4131 ntBASIC4.61□□□□□ -1.67
ABCA3Q99758 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
ABCA3Q99758 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
ABCA3Q99758 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
ABCA3Q99758 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
ABCA3Q99758 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
ABCA3Q99758 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ABCA3Q99758 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
ABCA3Q99758 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
ABCA3Q99758 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
ABCA3Q99758 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ABCA3Q99758 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
ABCA3Q99758 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ABCA3Q99758 RNA5SP42-201ENST00000364278 115 ntBASIC4.6□□□□□ -1.67
ABCA3Q99758 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.6□□□□□ -1.67
ABCA3Q99758 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.6□□□□□ -1.67
ABCA3Q99758 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.6□□□□□ -1.67
ABCA3Q99758 KC877373.1-201ENST00000479066 408 ntBASIC4.6□□□□□ -1.67
ABCA3Q99758 AC112198.1-201ENST00000505369 1220 ntBASIC4.6□□□□□ -1.67
ABCA3Q99758 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.6□□□□□ -1.67
ABCA3Q99758 RN7SKP209-201ENST00000516888 304 ntBASIC4.6□□□□□ -1.67
ABCA3Q99758 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.6□□□□□ -1.67
ABCA3Q99758 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ABCA3Q99758 AC092868.3-201ENST00000560515 784 ntBASIC4.6□□□□□ -1.67
ABCA3Q99758 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.6□□□□□ -1.67
ABCA3Q99758 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ABCA3Q99758 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ABCA3Q99758 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ABCA3Q99758 AC092111.2-201ENST00000611627 1414 ntBASIC4.6□□□□□ -1.67
ABCA3Q99758 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
ABCA3Q99758 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.6□□□□□ -1.67
ABCA3Q99758 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.6□□□□□ -1.67
ABCA3Q99758 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
ABCA3Q99758 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.6□□□□□ -1.67
ABCA3Q99758 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.6□□□□□ -1.67
ABCA3Q99758 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
ABCA3Q99758 Z83843.1-201ENST00000604070 3685 ntBASIC4.6□□□□□ -1.67
ABCA3Q99758 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ABCA3Q99758 IL6STP1-201ENST00000346911 1020 ntBASIC4.6□□□□□ -1.67
ABCA3Q99758 BX842559.1-201ENST00000419615 532 ntBASIC4.6□□□□□ -1.67
ABCA3Q99758 COTL1P1-201ENST00000422309 375 ntBASIC4.6□□□□□ -1.67
ABCA3Q99758 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.6□□□□□ -1.67
ABCA3Q99758 AL139132.1-201ENST00000431587 344 ntBASIC4.6□□□□□ -1.67
ABCA3Q99758 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC4.6□□□□□ -1.67
ABCA3Q99758 AC096638.2-201ENST00000434965 711 ntBASIC4.6□□□□□ -1.67
ABCA3Q99758 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.6□□□□□ -1.67
ABCA3Q99758 RN7SL863P-201ENST00000462370 296 ntBASIC4.6□□□□□ -1.67
ABCA3Q99758 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ABCA3Q99758 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.6□□□□□ -1.67
ABCA3Q99758 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.6□□□□□ -1.67
ABCA3Q99758 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.6□□□□□ -1.67
ABCA3Q99758 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.6□□□□□ -1.67
ABCA3Q99758 RNVU1-4-201ENST00000612985 164 ntBASIC4.6□□□□□ -1.67
ABCA3Q99758 AC007656.2-201ENST00000624902 4547 ntBASIC4.6□□□□□ -1.67
ABCA3Q99758 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ABCA3Q99758 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ABCA3Q99758 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
ABCA3Q99758 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
ABCA3Q99758 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
ABCA3Q99758 TNPO1P3-201ENST00000436471 2662 ntBASIC4.59□□□□□ -1.67
ABCA3Q99758 Z99755.1-201ENST00000414048 380 ntBASIC4.59□□□□□ -1.67
ABCA3Q99758 AL353705.1-201ENST00000433468 480 ntBASIC4.59□□□□□ -1.67
ABCA3Q99758 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.59□□□□□ -1.67
ABCA3Q99758 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.59□□□□□ -1.67
ABCA3Q99758 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.59□□□□□ -1.67
ABCA3Q99758 RNU6ATAC39P-201ENST00000516309 149 ntBASIC4.59□□□□□ -1.67
ABCA3Q99758 FTH1P11-201ENST00000517577 551 ntBASIC4.59□□□□□ -1.67
ABCA3Q99758 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.59□□□□□ -1.67
ABCA3Q99758 AC012603.1-201ENST00000606424 528 ntBASIC4.59□□□□□ -1.67
ABCA3Q99758 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.59□□□□□ -1.67
ABCA3Q99758 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.59□□□□□ -1.67
ABCA3Q99758 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.67
ABCA3Q99758 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms