Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC011037.1-201ENST00000483964 558 ntBASIC3.07□□□□□ -1.92
LSM3P62310 HMGB1P21-201ENST00000502313 581 ntBASIC3.07□□□□□ -1.92
LSM3P62310 FTH1P24-201ENST00000503502 462 ntBASIC3.07□□□□□ -1.92
LSM3P62310 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.07□□□□□ -1.92
LSM3P62310 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.07□□□□□ -1.92
LSM3P62310 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
LSM3P62310 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.07□□□□□ -1.92
LSM3P62310 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.07□□□□□ -1.92
LSM3P62310 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.07□□□□□ -1.92
LSM3P62310 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.07□□□□□ -1.92
LSM3P62310 AC044860.2-201ENST00000561005 179 ntBASIC3.07□□□□□ -1.92
LSM3P62310 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC3.07□□□□□ -1.92
LSM3P62310 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.07□□□□□ -1.92
LSM3P62310 AL365400.2-201ENST00000605604 902 ntBASIC3.07□□□□□ -1.92
LSM3P62310 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.07□□□□□ -1.92
LSM3P62310 RNU4-89P-201ENST00000607443 133 ntBASIC3.07□□□□□ -1.92
LSM3P62310 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
LSM3P62310 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
LSM3P62310 AC022893.2-201ENST00000564832 3296 ntBASIC3.07□□□□□ -1.92
LSM3P62310 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.07□□□□□ -1.92
LSM3P62310 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.06□□□□□ -1.92
LSM3P62310 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LSM3P62310 SNORA51.1-201ENST00000363243 140 ntBASIC3.06□□□□□ -1.92
LSM3P62310 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LSM3P62310 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.06□□□□□ -1.92
LSM3P62310 MT-RNR1-201ENST00000389680 954 ntBASIC3.06□□□□□ -1.92
LSM3P62310 U3.22-201ENST00000391120 215 ntBASIC3.06□□□□□ -1.92
LSM3P62310 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
LSM3P62310 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.06□□□□□ -1.92
LSM3P62310 BX510359.3-201ENST00000422168 306 ntBASIC3.06□□□□□ -1.92
LSM3P62310 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.06□□□□□ -1.92
LSM3P62310 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.06□□□□□ -1.92
LSM3P62310 AL627308.1-201ENST00000435693 821 ntBASIC3.06□□□□□ -1.92
LSM3P62310 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.06□□□□□ -1.92
LSM3P62310 AC093278.1-201ENST00000494700 600 ntBASIC3.06□□□□□ -1.92
LSM3P62310 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.06□□□□□ -1.92
LSM3P62310 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC3.06□□□□□ -1.92
LSM3P62310 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.06□□□□□ -1.92
LSM3P62310 SCARNA20.6-201ENST00000517251 106 ntBASIC3.06□□□□□ -1.92
LSM3P62310 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.06□□□□□ -1.92
LSM3P62310 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
LSM3P62310 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.06□□□□□ -1.92
LSM3P62310 OR5AN2P-201ENST00000534535 896 ntBASIC3.06□□□□□ -1.92
LSM3P62310 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.06□□□□□ -1.92
LSM3P62310 RARSP1-201ENST00000542842 1418 ntBASIC3.06□□□□□ -1.92
LSM3P62310 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.06□□□□□ -1.92
LSM3P62310 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.06□□□□□ -1.92
LSM3P62310 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.06□□□□□ -1.92
LSM3P62310 GMCL1P2-201ENST00000605230 823 ntBASIC3.06□□□□□ -1.92
LSM3P62310 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.06□□□□□ -1.92
LSM3P62310 AC018445.2-201ENST00000622987 260 ntBASIC3.06□□□□□ -1.92
LSM3P62310 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.06□□□□□ -1.92
LSM3P62310 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
LSM3P62310 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
LSM3P62310 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
LSM3P62310 AC053481.2-202ENST00000582394 1500 ntBASIC3.05□□□□□ -1.92
LSM3P62310 NMD3P1-201ENST00000439704 1488 ntBASIC3.05□□□□□ -1.92
LSM3P62310 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.05□□□□□ -1.92
LSM3P62310 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LSM3P62310 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.05□□□□□ -1.92
LSM3P62310 RNU4-39P-201ENST00000362455 127 ntBASIC3.05□□□□□ -1.92
LSM3P62310 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.05□□□□□ -1.92
LSM3P62310 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.05□□□□□ -1.92
LSM3P62310 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
LSM3P62310 RPL21P65-201ENST00000406094 466 ntBASIC3.05□□□□□ -1.92
LSM3P62310 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.05□□□□□ -1.92
LSM3P62310 Z99755.1-201ENST00000414048 380 ntBASIC3.05□□□□□ -1.92
LSM3P62310 RPL23AP69-201ENST00000431134 458 ntBASIC3.05□□□□□ -1.92
LSM3P62310 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.05□□□□□ -1.92
LSM3P62310 AC008264.1-201ENST00000447612 367 ntBASIC3.05□□□□□ -1.92
LSM3P62310 RPL7P31-201ENST00000450192 724 ntBASIC3.05□□□□□ -1.92
LSM3P62310 RN7SL75P-201ENST00000461926 281 ntBASIC3.05□□□□□ -1.92
LSM3P62310 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.05□□□□□ -1.92
LSM3P62310 AC093840.1-201ENST00000511599 336 ntBASIC3.05□□□□□ -1.92
LSM3P62310 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LSM3P62310 RNA5SP217-201ENST00000515959 91 ntBASIC3.05□□□□□ -1.92
LSM3P62310 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.05□□□□□ -1.92
LSM3P62310 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.05□□□□□ -1.92
LSM3P62310 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC3.05□□□□□ -1.92
LSM3P62310 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC3.05□□□□□ -1.92
LSM3P62310 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC3.05□□□□□ -1.92
LSM3P62310 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.05□□□□□ -1.92
LSM3P62310 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC3.05□□□□□ -1.92
LSM3P62310 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.05□□□□□ -1.92
LSM3P62310 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.05□□□□□ -1.92
LSM3P62310 AC084757.1-201ENST00000559987 490 ntBASIC3.05□□□□□ -1.92
LSM3P62310 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.05□□□□□ -1.92
LSM3P62310 AC067852.3-201ENST00000589177 561 ntBASIC3.05□□□□□ -1.92
LSM3P62310 SDR42E1P1-201ENST00000611327 477 ntBASIC3.05□□□□□ -1.92
LSM3P62310 AC116447.1-201ENST00000613153 453 ntBASIC3.05□□□□□ -1.92
LSM3P62310 U4.6-201ENST00000621618 127 ntBASIC3.05□□□□□ -1.92
LSM3P62310 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
LSM3P62310 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.05□□□□□ -1.92
LSM3P62310 CFTRP2-201ENST00000634304 199 ntBASIC3.05□□□□□ -1.92
LSM3P62310 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
LSM3P62310 AC093831.2-201ENST00000624393 3427 ntBASIC3.05□□□□□ -1.92
LSM3P62310 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
LSM3P62310 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LSM3P62310 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LSM3P62310 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms