Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC010486.1-201ENST00000511793 424 ntBASIC4.5□□□□□ -1.69
RGPD3A6NKT7 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 HCFC2P1-201ENST00000392864 1592 ntBASIC4.5□□□□□ -1.69
RGPD3A6NKT7 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 RPL12P22-201ENST00000519073 490 ntBASIC4.5□□□□□ -1.69
RGPD3A6NKT7 AC005476.1-201ENST00000554427 397 ntBASIC4.5□□□□□ -1.69
RGPD3A6NKT7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RGPD3A6NKT7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
RGPD3A6NKT7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.49□□□□□ -1.69
RGPD3A6NKT7 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.49□□□□□ -1.69
RGPD3A6NKT7 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.49□□□□□ -1.69
RGPD3A6NKT7 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
RGPD3A6NKT7 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RGPD3A6NKT7 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RGPD3A6NKT7 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.49□□□□□ -1.69
RGPD3A6NKT7 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.49□□□□□ -1.69
RGPD3A6NKT7 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
RGPD3A6NKT7 AL691447.1-201ENST00000419456 387 ntBASIC4.49□□□□□ -1.69
RGPD3A6NKT7 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.49□□□□□ -1.69
RGPD3A6NKT7 AL513175.1-201ENST00000431492 780 ntBASIC4.49□□□□□ -1.69
RGPD3A6NKT7 KCTD9P3-201ENST00000434597 1169 ntBASIC4.49□□□□□ -1.69
RGPD3A6NKT7 AC073587.1-201ENST00000447093 876 ntBASIC4.49□□□□□ -1.69
RGPD3A6NKT7 SEPT14P1-201ENST00000458703 648 ntBASIC4.49□□□□□ -1.69
RGPD3A6NKT7 U3.44-201ENST00000458938 192 ntBASIC4.49□□□□□ -1.69
RGPD3A6NKT7 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.49□□□□□ -1.69
RGPD3A6NKT7 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.49□□□□□ -1.69
RGPD3A6NKT7 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.49□□□□□ -1.69
RGPD3A6NKT7 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.49□□□□□ -1.69
RGPD3A6NKT7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RGPD3A6NKT7 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RGPD3A6NKT7 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RGPD3A6NKT7 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RGPD3A6NKT7 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RGPD3A6NKT7 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RGPD3A6NKT7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RGPD3A6NKT7 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
RGPD3A6NKT7 OOSP1P1-201ENST00000423265 274 ntBASIC4.48□□□□□ -1.69
RGPD3A6NKT7 BX890604.2-201ENST00000427883 474 ntBASIC4.48□□□□□ -1.69
RGPD3A6NKT7 NPM1P48-201ENST00000436002 853 ntBASIC4.48□□□□□ -1.69
RGPD3A6NKT7 AC006272.2-201ENST00000594725 163 ntBASIC4.48□□□□□ -1.69
RGPD3A6NKT7 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
RGPD3A6NKT7 Z83843.1-201ENST00000604070 3685 ntBASIC4.48□□□□□ -1.69
RGPD3A6NKT7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RGPD3A6NKT7 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.48□□□□□ -1.69
RGPD3A6NKT7 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.48□□□□□ -1.69
RGPD3A6NKT7 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.48□□□□□ -1.69
RGPD3A6NKT7 AC005002.1-201ENST00000447458 540 ntBASIC4.48□□□□□ -1.69
RGPD3A6NKT7 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.48□□□□□ -1.69
RGPD3A6NKT7 RNU6-579P-201ENST00000516879 102 ntBASIC4.48□□□□□ -1.69
RGPD3A6NKT7 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.48□□□□□ -1.69
RGPD3A6NKT7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
RGPD3A6NKT7 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.48□□□□□ -1.69
RGPD3A6NKT7 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.48□□□□□ -1.69
RGPD3A6NKT7 AC027281.1-201ENST00000574178 758 ntBASIC4.48□□□□□ -1.69
RGPD3A6NKT7 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.48□□□□□ -1.69
RGPD3A6NKT7 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.48□□□□□ -1.69
RGPD3A6NKT7 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.48□□□□□ -1.69
RGPD3A6NKT7 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RGPD3A6NKT7 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.47□□□□□ -1.69
RGPD3A6NKT7 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
RGPD3A6NKT7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RGPD3A6NKT7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
RGPD3A6NKT7 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RGPD3A6NKT7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
RGPD3A6NKT7 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
RGPD3A6NKT7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.47□□□□□ -1.69
RGPD3A6NKT7 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
RGPD3A6NKT7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
RGPD3A6NKT7 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RGPD3A6NKT7 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RGPD3A6NKT7 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RGPD3A6NKT7 SNORA48.8-201ENST00000391324 134 ntBASIC4.47□□□□□ -1.69
RGPD3A6NKT7 U3.39-201ENST00000408569 239 ntBASIC4.47□□□□□ -1.69
RGPD3A6NKT7 AC017079.2-201ENST00000416102 485 ntBASIC4.47□□□□□ -1.69
RGPD3A6NKT7 DPPA2P2-201ENST00000418220 897 ntBASIC4.47□□□□□ -1.69
RGPD3A6NKT7 BX842559.1-201ENST00000419615 532 ntBASIC4.47□□□□□ -1.69
RGPD3A6NKT7 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC4.47□□□□□ -1.69
RGPD3A6NKT7 AC000041.1-201ENST00000439655 175 ntBASIC4.47□□□□□ -1.69
RGPD3A6NKT7 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RGPD3A6NKT7 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RGPD3A6NKT7 SETP1-201ENST00000556014 845 ntBASIC4.47□□□□□ -1.69
RGPD3A6NKT7 RPL12P50-201ENST00000603116 116 ntBASIC4.47□□□□□ -1.69
RGPD3A6NKT7 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
RGPD3A6NKT7 ZNF826P-207ENST00000622273 1910 ntBASIC4.47□□□□□ -1.69
RGPD3A6NKT7 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RGPD3A6NKT7 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms