Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 ERCC6-202ENST00000374127 1782 ntBASIC3.04□□□□□ -1.92
HLA-DQA1P01909 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DQA1P01909 AC053481.2-202ENST00000582394 1500 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 METTL21EP-201ENST00000298105 713 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 RNU6-650P-201ENST00000365658 111 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 ATF1P1-201ENST00000406040 927 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 HMGB3P18-201ENST00000406327 590 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 MTATP6P31-201ENST00000406985 692 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 TATDN1P1-201ENST00000414123 891 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 RPL21P109-201ENST00000422213 475 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AC002075.2-201ENST00000425207 252 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AC005189.1-201ENST00000431286 310 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 RNFT1P2-201ENST00000443064 757 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AC073264.2-201ENST00000448886 166 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AL162591.2-201ENST00000449634 317 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AL353718.1-201ENST00000451028 517 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AC010683.1-201ENST00000473673 378 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 RPL23AP73-201ENST00000492507 471 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 ARL2BPP6-201ENST00000512757 439 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AC133963.2-201ENST00000513686 578 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 RN7SKP60-201ENST00000516985 239 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 NF1P5-201ENST00000588287 448 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AL671309.1-201ENST00000603750 544 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AP005019.3-201ENST00000620418 560 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 AC091905.1-201ENST00000624400 311 ntBASIC3.03□□□□□ -1.92
HLA-DQA1P01909 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DQA1P01909 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
HLA-DQA1P01909 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
HLA-DQA1P01909 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
HLA-DQA1P01909 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AL137100.1-201ENST00000556703 1620 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC007685.1-201ENST00000329806 452 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 MIR184-201ENST00000384962 84 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 RNU2-6P-201ENST00000411404 190 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 RPL23AP26-201ENST00000412728 464 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AL158825.1-201ENST00000414735 521 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC234782.4-201ENST00000417646 1048 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 UQCRBP1-201ENST00000421129 336 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 PNRC2P1-201ENST00000423940 420 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 RPL30P3-201ENST00000424262 333 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AL390879.2-203ENST00000426943 1121 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 USP9YP9-201ENST00000429406 715 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC011998.1-201ENST00000433403 117 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.02□□□□□ -1.93
HLA-DQA1P01909 RPL7P31-201ENST00000450192 724 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 RPL37P3-201ENST00000456825 293 ntBASIC3.02□□□□□ -1.93
HLA-DQA1P01909 MTND2P28-201ENST00000457540 1044 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms