Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 Z74021.1-201ENST00000423610 407 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.31□□□□□ -1.72
NKX2-2O95096 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.31□□□□□ -1.72
NKX2-2O95096 RPL7L1P1-201ENST00000448259 785 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.31□□□□□ -1.72
NKX2-2O95096 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.31□□□□□ -1.72
NKX2-2O95096 AC010307.1-201ENST00000467206 836 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-2O95096 AC011005.3-201ENST00000491624 395 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 AC091951.3-201ENST00000504093 246 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 AC018797.3-201ENST00000513388 1241 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.31□□□□□ -1.72
NKX2-2O95096 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.31□□□□□ -1.72
NKX2-2O95096 IGKV1-32-201ENST00000519290 311 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 AC027309.2-201ENST00000520566 192 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.31□□□□□ -1.72
NKX2-2O95096 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.31□□□□□ -1.72
NKX2-2O95096 AP001189.2-201ENST00000527320 189 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 AP000790.1-201ENST00000528891 737 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 OR5AN2P-201ENST00000534535 896 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.31□□□□□ -1.72
NKX2-2O95096 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-2O95096 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.31□□□□□ -1.72
NKX2-2O95096 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-2O95096 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.31□□□□□ -1.72
NKX2-2O95096 AC209154.1-201ENST00000582156 337 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.31□□□□□ -1.72
NKX2-2O95096 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.31□□□□□ -1.72
NKX2-2O95096 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.31□□□□□ -1.72
NKX2-2O95096 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-2O95096 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-2O95096 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-2O95096 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-2O95096 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-2O95096 MTND5P28-201ENST00000438005 1594 ntBASIC4.31□□□□□ -1.72
NKX2-2O95096 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
NKX2-2O95096 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NKX2-2O95096 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.3□□□□□ -1.72
NKX2-2O95096 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-2O95096 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.3□□□□□ -1.72
NKX2-2O95096 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
NKX2-2O95096 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-2O95096 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
NKX2-2O95096 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
NKX2-2O95096 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NKX2-2O95096 AC022893.2-201ENST00000564832 3296 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-2O95096 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NKX2-2O95096 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.3□□□□□ -1.72
NKX2-2O95096 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-2O95096 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NKX2-2O95096 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-2O95096 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-2O95096 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-2O95096 RNU5D-1-201ENST00000363299 116 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 SNORA58B-201ENST00000364259 136 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 MTND4P13-201ENST00000402078 1023 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 ATG4AP1-201ENST00000416893 538 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.3□□□□□ -1.72
NKX2-2O95096 SKP1P3-201ENST00000429280 487 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.3□□□□□ -1.72
NKX2-2O95096 RPL36P19-201ENST00000430744 301 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 AC005345.1-201ENST00000431868 217 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 AL450263.2-201ENST00000439400 589 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.3□□□□□ -1.72
NKX2-2O95096 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.3□□□□□ -1.72
NKX2-2O95096 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
NKX2-2O95096 RPS20P21-201ENST00000466859 343 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 MTCYBP35-201ENST00000503630 1137 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.3□□□□□ -1.72
NKX2-2O95096 FABP5P12-201ENST00000515543 389 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 RN7SKP31-201ENST00000516354 278 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 RNU5A-4P-201ENST00000516588 111 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 SNORA48.10-201ENST00000516965 160 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.3□□□□□ -1.72
NKX2-2O95096 CYCSP28-201ENST00000534284 321 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.3□□□□□ -1.72
NKX2-2O95096 AP000619.3-201ENST00000535634 1127 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.3□□□□□ -1.72
NKX2-2O95096 AL390334.1-201ENST00000556395 450 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.3□□□□□ -1.72
NKX2-2O95096 AC124068.1-201ENST00000563131 678 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 AL132657.2-201ENST00000564417 358 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 MTCYBP28-201ENST00000566728 1132 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.3□□□□□ -1.72
NKX2-2O95096 AL451074.6-201ENST00000608512 729 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 AC097478.2-201ENST00000610572 514 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 AL355493.4-201ENST00000618530 292 ntBASIC4.3□□□□□ -1.72
NKX2-2O95096 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-2O95096 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.3□□□□□ -1.72
NKX2-2O95096 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-2O95096 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-2O95096 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-2O95096 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
NKX2-2O95096 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.3□□□□□ -1.72
NKX2-2O95096 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
NKX2-2O95096 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
NKX2-2O95096 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.3□□□□□ -1.72
NKX2-2O95096 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NKX2-2O95096 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms