RNA–Protein interactions for RNA: ENST00000517407.1

AC108515.1-201, humanhuman

TSL 3 BASIC

Gene AC108515.1, Length 525 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC108515.1-201ENST00000517407 AEBP2Q6ZN18 517 aaPredicted RBP27.54■■■□□ 2
AC108515.1-201ENST00000517407 CHIC1Q5VXU3 224 aa26.04■■□□□ 1.76
AC108515.1-201ENST00000517407 SENP3Q9H4L4 574 aaPredicted RBP23.63■■□□□ 1.37
AC108515.1-201ENST00000517407 PHF23Q9BUL5 403 aaPredicted RBP23.29■■□□□ 1.32
AC108515.1-201ENST00000517407 FOXD1Q16676 465 aa21.99■■□□□ 1.11
AC108515.1-201ENST00000517407 PLPPR3Q6T4P5 718 aa20.79■□□□□ 0.92
AC108515.1-201ENST00000517407 MSH5O43196 834 aa20.72■□□□□ 0.91
AC108515.1-201ENST00000517407 PIAS4Q8N2W9 510 aaPredicted RBP20.58■□□□□ 0.89
AC108515.1-201ENST00000517407 POTEDQ86YR6 584 aa20.46■□□□□ 0.87
AC108515.1-201ENST00000517407 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
AC108515.1-201ENST00000517407 ADRA2BP18089 450 aa20.38■□□□□ 0.85
AC108515.1-201ENST00000517407 SCAF1Q9H7N4 1312 aaKnown RBP18.77■□□□□ 0.6
AC108515.1-201ENST00000517407 MAPK8IP2Q13387 824 aaPredicted RBP18.77■□□□□ 0.6
AC108515.1-201ENST00000517407 DMRT2Q9Y5R5 561 aa18.66■□□□□ 0.58
AC108515.1-201ENST00000517407 PPP4R3CPQ6ZMV5 832 aa18.19■□□□□ 0.5
AC108515.1-201ENST00000517407 DCAF8L1A6NGE4 600 aa18.08■□□□□ 0.48
AC108515.1-201ENST00000517407 CACNB1Q02641 598 aaPredicted RBP17.95■□□□□ 0.46
AC108515.1-201ENST00000517407 HOXD11P31277 338 aaPredicted RBP17.9■□□□□ 0.46
AC108515.1-201ENST00000517407 CNKSR2Q8WXI2 1034 aa17.9■□□□□ 0.46
AC108515.1-201ENST00000517407 RNF216Q9NWF9 866 aaPredicted RBP17.76■□□□□ 0.43
AC108515.1-201ENST00000517407 RNF39Q9H2S5 420 aa17.6■□□□□ 0.41
AC108515.1-201ENST00000517407 NCBP3Q53F19 620 aaKnown RBP17.52■□□□□ 0.4
AC108515.1-201ENST00000517407 C1QBPQ07021 282 aaKnown RBP17.39■□□□□ 0.37
AC108515.1-201ENST00000517407 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.36
AC108515.1-201ENST00000517407 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.34
AC108515.1-201ENST00000517407 NPM3O75607 178 aaKnown RBP17.14■□□□□ 0.33
AC108515.1-201ENST00000517407 U3KPZ7 1027 aaPredicted RBP16.67■□□□□ 0.26
AC108515.1-201ENST00000517407 KCNA4P22459 653 aa16.65■□□□□ 0.26
AC108515.1-201ENST00000517407 CAPN15O75808 1086 aa16.6■□□□□ 0.25
AC108515.1-201ENST00000517407 SPINK5Q9NQ38 1064 aaPredicted RBP16.51■□□□□ 0.23
AC108515.1-201ENST00000517407 DSG3P32926 999 aa16.44■□□□□ 0.22
AC108515.1-201ENST00000517407 SLC4A2P04920 1241 aa16.38■□□□□ 0.21
AC108515.1-201ENST00000517407 APLP2Q06481 763 aa16.35■□□□□ 0.21
AC108515.1-201ENST00000517407 TRHP20396 242 aaPredicted RBP16.29■□□□□ 0.2
AC108515.1-201ENST00000517407 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.26■□□□□ 0.19
AC108515.1-201ENST00000517407 HNRNPUL2Q1KMD3 747 aaKnown RBP16.26■□□□□ 0.19
AC108515.1-201ENST00000517407 ZNF219Q9P2Y4 722 aaPredicted RBP16.21■□□□□ 0.19
AC108515.1-201ENST00000517407 ABCB7O75027 752 aa16.16■□□□□ 0.18
AC108515.1-201ENST00000517407 SAMD1Q6SPF0 538 aaPredicted RBP16.13■□□□□ 0.17
AC108515.1-201ENST00000517407 POTEHQ6S545 545 aa16.04■□□□□ 0.16
AC108515.1-201ENST00000517407 MYCNP04198 464 aaPredicted RBP15.9■□□□□ 0.14
AC108515.1-201ENST00000517407 POLA2Q14181 598 aa15.78■□□□□ 0.12
AC108515.1-201ENST00000517407 RBM42Q9BTD8 480 aaKnown RBP15.77■□□□□ 0.12
AC108515.1-201ENST00000517407 SLC4A1APQ9BWU0 796 aaKnown RBP15.76■□□□□ 0.11
AC108515.1-201ENST00000517407 FOXD4L1Q9NU39 408 aa15.64■□□□□ 0.09
AC108515.1-201ENST00000517407 ATF5Q9Y2D1 282 aaPredicted RBP15.48■□□□□ 0.07
AC108515.1-201ENST00000517407 CHRDL2Q6WN34 429 aa15.45■□□□□ 0.06
AC108515.1-201ENST00000517407 ZBTB12Q9Y330 459 aaPredicted RBP15.45■□□□□ 0.06
AC108515.1-201ENST00000517407 AKT1S1Q96B36 256 aa15.34■□□□□ 0.05
AC108515.1-201ENST00000517407 ZBTB22O15209 634 aa15.23■□□□□ 0.03
AC108515.1-201ENST00000517407 OSCARQ8IYS5 282 aa15.23■□□□□ 0.03
AC108515.1-201ENST00000517407 REM2Q8IYK8 340 aaPredicted RBP15.18■□□□□ 0.02
AC108515.1-201ENST00000517407 ATXN8OSP0DMR3 200 aa15.17■□□□□ 0.02
AC108515.1-201ENST00000517407 FBLN2P98095 1184 aa15.04■□□□□ -0
AC108515.1-201ENST00000517407 PIP4P2Q8N4L2 257 aa15.02■□□□□ -0
AC108515.1-201ENST00000517407 PITPNM1O00562 1244 aa14.99□□□□□ -0.01
AC108515.1-201ENST00000517407 SP7Q8TDD2 431 aaPredicted RBP14.95□□□□□ -0.02
AC108515.1-201ENST00000517407 SPDYE2BA6NHP3 402 aa14.93□□□□□ -0.02
AC108515.1-201ENST00000517407 SPDYE6P0CI01 402 aa14.93□□□□□ -0.02
AC108515.1-201ENST00000517407 SPDYE2Q495Y8 402 aa14.93□□□□□ -0.02
AC108515.1-201ENST00000517407 HAX1O00165 279 aa14.91□□□□□ -0.02
AC108515.1-201ENST00000517407 FXR2P51116 673 aaKnown RBP eCLIP14.89□□□□□ -0.03
AC108515.1-201ENST00000517407 CLEC11AQ9Y240 323 aa14.8□□□□□ -0.04
AC108515.1-201ENST00000517407 ZNF692Q9BU19 519 aaPredicted RBP14.78□□□□□ -0.04
AC108515.1-201ENST00000517407 SPDYE1Q8NFV5 336 aaPredicted RBP14.75□□□□□ -0.05
AC108515.1-201ENST00000517407 MKRN4PQ13434 485 aaPredicted RBP14.74□□□□□ -0.05
AC108515.1-201ENST00000517407 PRKAR2AP13861 404 aaKnown RBP14.67□□□□□ -0.06
AC108515.1-201ENST00000517407 SSUH2Q9Y2M2 353 aa14.63□□□□□ -0.07
AC108515.1-201ENST00000517407 EVX2Q03828 476 aa14.56□□□□□ -0.08
AC108515.1-201ENST00000517407 PABPN1Q86U42 306 aaKnown RBP eCLIP14.53□□□□□ -0.08
AC108515.1-201ENST00000517407 PRR29P0C7W0 189 aa14.51□□□□□ -0.09
AC108515.1-201ENST00000517407 CHADLQ6NUI6 762 aa14.45□□□□□ -0.1
AC108515.1-201ENST00000517407 C19orf67A6NJJ6 358 aa14.43□□□□□ -0.1
AC108515.1-201ENST00000517407 CSRNP3Q8WYN3 585 aa14.43□□□□□ -0.1
AC108515.1-201ENST00000517407 GABBR2O75899 941 aa14.29□□□□□ -0.12
AC108515.1-201ENST00000517407 EHMT2Q96KQ7 1210 aa14.24□□□□□ -0.13
AC108515.1-201ENST00000517407 FARP1Q9Y4F1 1045 aaPredicted RBP14.21□□□□□ -0.13
AC108515.1-201ENST00000517407 CD44P16070 742 aaKnown RBP14.19□□□□□ -0.14
AC108515.1-201ENST00000517407 STAG3Q9UJ98 1225 aa14.14□□□□□ -0.15
AC108515.1-201ENST00000517407 SPDYE4A6NLX3 237 aa14.06□□□□□ -0.16
AC108515.1-201ENST00000517407 CLCN6P51797 869 aa14.06□□□□□ -0.16
AC108515.1-201ENST00000517407 LHX8Q68G74 356 aa14.06□□□□□ -0.16
AC108515.1-201ENST00000517407 CREBZFQ9NS37 354 aa13.99□□□□□ -0.17
AC108515.1-201ENST00000517407 ZRANB1Q9UGI0 708 aa13.99□□□□□ -0.17
AC108515.1-201ENST00000517407 DCBLD2Q96PD2 775 aa13.97□□□□□ -0.17
AC108515.1-201ENST00000517407 POTEIP0CG38 1075 aa13.91□□□□□ -0.18
AC108515.1-201ENST00000517407 PAK3O75914 559 aaPredicted RBP13.9□□□□□ -0.18
AC108515.1-201ENST00000517407 ZNF579Q8NAF0 562 aaKnown RBP13.9□□□□□ -0.18
AC108515.1-201ENST00000517407 NPM1P06748 294 aaKnown RBP eCLIP13.86□□□□□ -0.19
AC108515.1-201ENST00000517407 GALR2O43603 387 aaPredicted RBP13.76□□□□□ -0.21
AC108515.1-201ENST00000517407 PHF12Q96QT6 1004 aa13.72□□□□□ -0.21
AC108515.1-201ENST00000517407 MNX1P50219 401 aaPredicted RBP13.66□□□□□ -0.22
AC108515.1-201ENST00000517407 PLEKHG5O94827 1062 aa13.58□□□□□ -0.24
AC108515.1-201ENST00000517407 TSPYL2Q9H2G4 693 aaPredicted RBP13.58□□□□□ -0.24
AC108515.1-201ENST00000517407 PROM2Q8N271 834 aa13.55□□□□□ -0.24
AC108515.1-201ENST00000517407 MIER1Q8N108 512 aa13.52□□□□□ -0.25
AC108515.1-201ENST00000517407 MS4A3Q96HJ5 214 aa13.52□□□□□ -0.25
AC108515.1-201ENST00000517407 PELP1Q8IZL8 1130 aaKnown RBP13.48□□□□□ -0.25
AC108515.1-201ENST00000517407 OTUD5Q96G74 571 aa13.47□□□□□ -0.25
AC108515.1-201ENST00000517407 POTEB2H3BUK9 544 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms