RNA–Protein interactions for RNA: ENST00000516588.1

RNU5A-4P-201, Transcript of RNA, U5A small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU5A-4P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU5A-4P-201ENST00000516588 AEBP2Q6ZN18 517 aaPredicted RBP31.59■■■□□ 2.65
RNU5A-4P-201ENST00000516588 CHIC1Q5VXU3 224 aa29.58■■■□□ 2.33
RNU5A-4P-201ENST00000516588 SENP3Q9H4L4 574 aaPredicted RBP26.83■■□□□ 1.89
RNU5A-4P-201ENST00000516588 PHF23Q9BUL5 403 aaPredicted RBP26.54■■□□□ 1.84
RNU5A-4P-201ENST00000516588 FOXD1Q16676 465 aa25.17■■□□□ 1.62
RNU5A-4P-201ENST00000516588 POTEDQ86YR6 584 aa23.67■■□□□ 1.38
RNU5A-4P-201ENST00000516588 MSH5O43196 834 aa23.54■■□□□ 1.36
RNU5A-4P-201ENST00000516588 PLPPR3Q6T4P5 718 aa23.43■■□□□ 1.34
RNU5A-4P-201ENST00000516588 PIAS4Q8N2W9 510 aaPredicted RBP23.38■■□□□ 1.33
RNU5A-4P-201ENST00000516588 PPP6R1Q9UPN7 881 aa23.36■■□□□ 1.33
RNU5A-4P-201ENST00000516588 ADRA2BP18089 450 aa23.24■■□□□ 1.31
RNU5A-4P-201ENST00000516588 MAPK8IP2Q13387 824 aaPredicted RBP21.49■■□□□ 1.03
RNU5A-4P-201ENST00000516588 DMRT2Q9Y5R5 561 aa21.27■■□□□ 1
RNU5A-4P-201ENST00000516588 SCAF1Q9H7N4 1312 aaKnown RBP21.07■□□□□ 0.96
RNU5A-4P-201ENST00000516588 PPP4R3CPQ6ZMV5 832 aa20.56■□□□□ 0.88
RNU5A-4P-201ENST00000516588 CACNB1Q02641 598 aaPredicted RBP20.47■□□□□ 0.87
RNU5A-4P-201ENST00000516588 DCAF8L1A6NGE4 600 aa20.43■□□□□ 0.86
RNU5A-4P-201ENST00000516588 HOXD11P31277 338 aaPredicted RBP20.36■□□□□ 0.85
RNU5A-4P-201ENST00000516588 CNKSR2Q8WXI2 1034 aa20.19■□□□□ 0.82
RNU5A-4P-201ENST00000516588 RNF39Q9H2S5 420 aa20.13■□□□□ 0.81
RNU5A-4P-201ENST00000516588 RNF216Q9NWF9 866 aaPredicted RBP20.1■□□□□ 0.81
RNU5A-4P-201ENST00000516588 C1QBPQ07021 282 aaKnown RBP19.76■□□□□ 0.75
RNU5A-4P-201ENST00000516588 DNAJC5BQ9UF47 199 aa19.63■□□□□ 0.73
RNU5A-4P-201ENST00000516588 NCBP3Q53F19 620 aaKnown RBP19.56■□□□□ 0.72
RNU5A-4P-201ENST00000516588 NPM3O75607 178 aaKnown RBP19.4■□□□□ 0.7
RNU5A-4P-201ENST00000516588 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.38■□□□□ 0.69
RNU5A-4P-201ENST00000516588 U3KPZ7 1027 aaPredicted RBP18.99■□□□□ 0.63
RNU5A-4P-201ENST00000516588 SPINK5Q9NQ38 1064 aaPredicted RBP18.86■□□□□ 0.61
RNU5A-4P-201ENST00000516588 CAPN15O75808 1086 aa18.77■□□□□ 0.6
RNU5A-4P-201ENST00000516588 KCNA4P22459 653 aa18.77■□□□□ 0.6
RNU5A-4P-201ENST00000516588 DSG3P32926 999 aa18.77■□□□□ 0.6
RNU5A-4P-201ENST00000516588 SLC4A2P04920 1241 aa18.66■□□□□ 0.58
RNU5A-4P-201ENST00000516588 POTEHQ6S545 545 aa18.45■□□□□ 0.54
RNU5A-4P-201ENST00000516588 TRHP20396 242 aaPredicted RBP18.41■□□□□ 0.54
RNU5A-4P-201ENST00000516588 ABCB7O75027 752 aa18.36■□□□□ 0.53
RNU5A-4P-201ENST00000516588 ZNF219Q9P2Y4 722 aaPredicted RBP18.25■□□□□ 0.51
RNU5A-4P-201ENST00000516588 APLP2Q06481 763 aa18.22■□□□□ 0.51
RNU5A-4P-201ENST00000516588 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.18■□□□□ 0.5
RNU5A-4P-201ENST00000516588 HNRNPUL2Q1KMD3 747 aaKnown RBP18.18■□□□□ 0.5
RNU5A-4P-201ENST00000516588 SAMD1Q6SPF0 538 aaPredicted RBP18.09■□□□□ 0.49
RNU5A-4P-201ENST00000516588 MYCNP04198 464 aaPredicted RBP17.86■□□□□ 0.45
RNU5A-4P-201ENST00000516588 POLA2Q14181 598 aa17.86■□□□□ 0.45
RNU5A-4P-201ENST00000516588 RBM42Q9BTD8 480 aaKnown RBP17.77■□□□□ 0.44
RNU5A-4P-201ENST00000516588 ATF5Q9Y2D1 282 aaPredicted RBP17.65■□□□□ 0.42
RNU5A-4P-201ENST00000516588 CHRDL2Q6WN34 429 aa17.61■□□□□ 0.41
RNU5A-4P-201ENST00000516588 SLC4A1APQ9BWU0 796 aaKnown RBP17.58■□□□□ 0.4
RNU5A-4P-201ENST00000516588 FOXD4L1Q9NU39 408 aa17.52■□□□□ 0.4
RNU5A-4P-201ENST00000516588 AKT1S1Q96B36 256 aa17.36■□□□□ 0.37
RNU5A-4P-201ENST00000516588 ZBTB22O15209 634 aa17.29■□□□□ 0.36
RNU5A-4P-201ENST00000516588 ZBTB12Q9Y330 459 aaPredicted RBP17.29■□□□□ 0.36
RNU5A-4P-201ENST00000516588 OSCARQ8IYS5 282 aa17.28■□□□□ 0.36
RNU5A-4P-201ENST00000516588 REM2Q8IYK8 340 aaPredicted RBP17.26■□□□□ 0.35
RNU5A-4P-201ENST00000516588 PIP4P2Q8N4L2 257 aa17.16■□□□□ 0.34
RNU5A-4P-201ENST00000516588 SP7Q8TDD2 431 aaPredicted RBP17.12■□□□□ 0.33
RNU5A-4P-201ENST00000516588 PITPNM1O00562 1244 aa17.08■□□□□ 0.32
RNU5A-4P-201ENST00000516588 FXR2P51116 673 aaKnown RBP eCLIP17■□□□□ 0.31
RNU5A-4P-201ENST00000516588 ATXN8OSP0DMR3 200 aa16.97■□□□□ 0.31
RNU5A-4P-201ENST00000516588 HAX1O00165 279 aa16.93■□□□□ 0.3
RNU5A-4P-201ENST00000516588 EVX2Q03828 476 aa16.82■□□□□ 0.28
RNU5A-4P-201ENST00000516588 SPDYE2BA6NHP3 402 aa16.81■□□□□ 0.28
RNU5A-4P-201ENST00000516588 SPDYE6P0CI01 402 aa16.81■□□□□ 0.28
RNU5A-4P-201ENST00000516588 SPDYE2Q495Y8 402 aa16.81■□□□□ 0.28
RNU5A-4P-201ENST00000516588 FBLN2P98095 1184 aa16.79■□□□□ 0.28
RNU5A-4P-201ENST00000516588 MKRN4PQ13434 485 aaPredicted RBP16.78■□□□□ 0.28
RNU5A-4P-201ENST00000516588 CLEC11AQ9Y240 323 aa16.66■□□□□ 0.26
RNU5A-4P-201ENST00000516588 PRKAR2AP13861 404 aaKnown RBP16.63■□□□□ 0.25
RNU5A-4P-201ENST00000516588 ZNF692Q9BU19 519 aaPredicted RBP16.61■□□□□ 0.25
RNU5A-4P-201ENST00000516588 SPDYE1Q8NFV5 336 aaPredicted RBP16.6■□□□□ 0.25
RNU5A-4P-201ENST00000516588 SSUH2Q9Y2M2 353 aa16.59■□□□□ 0.25
RNU5A-4P-201ENST00000516588 C19orf67A6NJJ6 358 aa16.46■□□□□ 0.23
RNU5A-4P-201ENST00000516588 CHADLQ6NUI6 762 aa16.44■□□□□ 0.22
RNU5A-4P-201ENST00000516588 PABPN1Q86U42 306 aaKnown RBP eCLIP16.37■□□□□ 0.21
RNU5A-4P-201ENST00000516588 GABBR2O75899 941 aa16.33■□□□□ 0.2
RNU5A-4P-201ENST00000516588 PRR29P0C7W0 189 aa16.31■□□□□ 0.2
RNU5A-4P-201ENST00000516588 CSRNP3Q8WYN3 585 aa16.18■□□□□ 0.18
RNU5A-4P-201ENST00000516588 FARP1Q9Y4F1 1045 aaPredicted RBP16.09■□□□□ 0.17
RNU5A-4P-201ENST00000516588 LHX8Q68G74 356 aa16.08■□□□□ 0.16
RNU5A-4P-201ENST00000516588 CD44P16070 742 aaKnown RBP16.06■□□□□ 0.16
RNU5A-4P-201ENST00000516588 POTEIP0CG38 1075 aa16.04■□□□□ 0.16
RNU5A-4P-201ENST00000516588 CREBZFQ9NS37 354 aa15.88■□□□□ 0.13
RNU5A-4P-201ENST00000516588 ZRANB1Q9UGI0 708 aa15.8■□□□□ 0.12
RNU5A-4P-201ENST00000516588 CLCN6P51797 869 aa15.78■□□□□ 0.12
RNU5A-4P-201ENST00000516588 ZNF579Q8NAF0 562 aaKnown RBP15.78■□□□□ 0.12
RNU5A-4P-201ENST00000516588 EHMT2Q96KQ7 1210 aa15.76■□□□□ 0.11
RNU5A-4P-201ENST00000516588 DCBLD2Q96PD2 775 aa15.75■□□□□ 0.11
RNU5A-4P-201ENST00000516588 STAG3Q9UJ98 1225 aa15.75■□□□□ 0.11
RNU5A-4P-201ENST00000516588 SPDYE4A6NLX3 237 aa15.74■□□□□ 0.11
RNU5A-4P-201ENST00000516588 GALR2O43603 387 aaPredicted RBP15.69■□□□□ 0.1
RNU5A-4P-201ENST00000516588 PHF12Q96QT6 1004 aa15.59■□□□□ 0.09
RNU5A-4P-201ENST00000516588 MNX1P50219 401 aaPredicted RBP15.58■□□□□ 0.08
RNU5A-4P-201ENST00000516588 POTEB2H3BUK9 544 aa15.53■□□□□ 0.08
RNU5A-4P-201ENST00000516588 PAK3O75914 559 aaPredicted RBP15.48■□□□□ 0.07
RNU5A-4P-201ENST00000516588 OTUD5Q96G74 571 aa15.48■□□□□ 0.07
RNU5A-4P-201ENST00000516588 PELP1Q8IZL8 1130 aaKnown RBP15.47■□□□□ 0.07
RNU5A-4P-201ENST00000516588 NPM1P06748 294 aaKnown RBP eCLIP15.46■□□□□ 0.07
RNU5A-4P-201ENST00000516588 MS4A3Q96HJ5 214 aa15.35■□□□□ 0.05
RNU5A-4P-201ENST00000516588 PROM2Q8N271 834 aa15.31■□□□□ 0.04
RNU5A-4P-201ENST00000516588 PLSCR2Q9NRY7 297 aa15.31■□□□□ 0.04
RNU5A-4P-201ENST00000516588 ATMINO43313 823 aaPredicted RBP15.28■□□□□ 0.04
RNU5A-4P-201ENST00000516588 ASTLQ6HA08 431 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms