Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 AC116050.1-206ENST00000423774 213 ntBASIC8.72□□□□□ -1.01
HOXD11P31277 CFL1P7-201ENST00000424759 486 ntBASIC8.72□□□□□ -1.01
HOXD11P31277 IFNWP5-201ENST00000445100 588 ntBASIC8.72□□□□□ -1.01
HOXD11P31277 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC8.72□□□□□ -1.01
HOXD11P31277 AC016027.4-201ENST00000450866 277 ntBASIC8.72□□□□□ -1.01
HOXD11P31277 AC087588.1-201ENST00000462203 316 ntBASIC8.72□□□□□ -1.01
HOXD11P31277 AC084017.1-201ENST00000483240 860 ntBASIC8.72□□□□□ -1.01
HOXD11P31277 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC8.72□□□□□ -1.01
HOXD11P31277 AC008581.1-201ENST00000512650 385 ntTSL 3 BASIC8.72□□□□□ -1.01
HOXD11P31277 RNA5SP281-201ENST00000516504 135 ntBASIC8.72□□□□□ -1.01
HOXD11P31277 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC8.72□□□□□ -1.01
HOXD11P31277 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
HOXD11P31277 AC090022.1-201ENST00000546569 311 ntBASIC8.72□□□□□ -1.01
HOXD11P31277 PTCSC3-201ENST00000556013 571 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
HOXD11P31277 AC093249.5-201ENST00000568120 430 ntBASIC8.72□□□□□ -1.01
HOXD11P31277 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC8.72□□□□□ -1.01
HOXD11P31277 FXYD1-205ENST00000588607 619 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
HOXD11P31277 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC8.72□□□□□ -1.01
HOXD11P31277 ZNF615-206ENST00000597747 704 ntTSL 5 BASIC8.72□□□□□ -1.01
HOXD11P31277 AC008385.1-201ENST00000604421 355 ntBASIC8.72□□□□□ -1.01
HOXD11P31277 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC8.72□□□□□ -1.01
HOXD11P31277 5_8S_rRNA.2-201ENST00000612732 151 ntBASIC8.72□□□□□ -1.01
HOXD11P31277 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
HOXD11P31277 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
HOXD11P31277 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC8.72□□□□□ -1.01
HOXD11P31277 AC087203.2-201ENST00000526502 1587 ntBASIC8.72□□□□□ -1.01
HOXD11P31277 AC012513.3-201ENST00000623250 2116 ntBASIC8.72□□□□□ -1.01
HOXD11P31277 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HOXD11P31277 ZNF823-201ENST00000341191 2423 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HOXD11P31277 CDH13-202ENST00000428848 2195 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
HOXD11P31277 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC8.72□□□□□ -1.01
HOXD11P31277 SNX13-203ENST00000428135 6357 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HOXD11P31277 ISX-202ENST00000404699 3094 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HOXD11P31277 GNA12-203ENST00000407904 3918 ntTSL 2 BASIC8.72□□□□□ -1.01
HOXD11P31277 BTN3A1-202ENST00000289361 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
HOXD11P31277 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC8.71□□□□□ -1.01
HOXD11P31277 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC8.71□□□□□ -1.01
HOXD11P31277 ABI1-205ENST00000376139 3516 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
HOXD11P31277 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
HOXD11P31277 NR2C1-202ENST00000333003 4143 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
HOXD11P31277 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
HOXD11P31277 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
HOXD11P31277 TNPO3-203ENST00000471234 3283 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
HOXD11P31277 GRHL1-201ENST00000324907 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
HOXD11P31277 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
HOXD11P31277 ENOX1-AS1-201ENST00000444442 3907 ntTSL 5 BASIC8.71□□□□□ -1.01
HOXD11P31277 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.01
HOXD11P31277 RASGRP1-213ENST00000561180 2707 ntTSL 2 BASIC8.71□□□□□ -1.01
HOXD11P31277 MOBP-202ENST00000383754 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
HOXD11P31277 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC8.71□□□□□ -1.01
HOXD11P31277 AMMECR1L-201ENST00000272647 4658 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
HOXD11P31277 NKAIN2-202ENST00000368417 3115 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
HOXD11P31277 FNBP1L-201ENST00000260506 5341 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.01
HOXD11P31277 CNR1-204ENST00000428600 1550 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
HOXD11P31277 LRRC37A2-203ENST00000576629 5669 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
HOXD11P31277 S100A13-201ENST00000339556 514 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
HOXD11P31277 RNU5A-1-201ENST00000362698 116 ntBASIC8.71□□□□□ -1.02
HOXD11P31277 RNU6-1048P-201ENST00000364054 107 ntBASIC8.71□□□□□ -1.02
HOXD11P31277 RNVU1-1-201ENST00000384610 164 ntBASIC8.71□□□□□ -1.02
HOXD11P31277 SNORD12C-201ENST00000386307 89 ntBASIC8.71□□□□□ -1.02
HOXD11P31277 RNU6-821P-201ENST00000390995 107 ntBASIC8.71□□□□□ -1.02
HOXD11P31277 RPL21P17-201ENST00000397467 475 ntBASIC8.71□□□□□ -1.02
HOXD11P31277 RNU2-43P-201ENST00000410306 190 ntBASIC8.71□□□□□ -1.02
HOXD11P31277 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC8.71□□□□□ -1.02
HOXD11P31277 AC112498.1-201ENST00000444401 332 ntBASIC8.71□□□□□ -1.02
HOXD11P31277 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC8.71□□□□□ -1.02
HOXD11P31277 RPL35AP15-201ENST00000468042 339 ntBASIC8.71□□□□□ -1.02
HOXD11P31277 RN7SL585P-201ENST00000470538 280 ntBASIC8.71□□□□□ -1.02
HOXD11P31277 AC110772.1-201ENST00000503037 474 ntTSL 3 BASIC8.71□□□□□ -1.02
HOXD11P31277 AC114801.1-201ENST00000512633 297 ntBASIC8.71□□□□□ -1.02
HOXD11P31277 RNU6-347P-201ENST00000516658 105 ntBASIC8.71□□□□□ -1.02
HOXD11P31277 AC104117.3-201ENST00000519491 674 ntTSL 3 BASIC8.71□□□□□ -1.02
HOXD11P31277 UTP23-205ENST00000520733 369 ntTSL 3 BASIC8.71□□□□□ -1.02
HOXD11P31277 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC8.71□□□□□ -1.02
HOXD11P31277 AL121917.2-201ENST00000605044 390 ntBASIC8.71□□□□□ -1.02
HOXD11P31277 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC8.71□□□□□ -1.02
HOXD11P31277 BSNDP3-201ENST00000617487 364 ntBASIC8.71□□□□□ -1.02
HOXD11P31277 ANAPC1-210ENST00000628342 450 ntTSL 5 BASIC8.71□□□□□ -1.02
HOXD11P31277 ASB8-218ENST00000629941 278 ntTSL 5 BASIC8.71□□□□□ -1.02
HOXD11P31277 MIR3120-201ENST00000636555 81 ntBASIC8.71□□□□□ -1.02
HOXD11P31277 PFKM-210ENST00000547587 2867 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
HOXD11P31277 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
HOXD11P31277 SCAF11-202ENST00000369367 7543 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
HOXD11P31277 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
HOXD11P31277 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC8.71□□□□□ -1.02
HOXD11P31277 OTX2-201ENST00000339475 3001 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
HOXD11P31277 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
HOXD11P31277 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC8.71□□□□□ -1.02
HOXD11P31277 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
HOXD11P31277 AC109779.1-203ENST00000411727 2100 ntTSL 2 BASIC8.71□□□□□ -1.02
HOXD11P31277 CSTF1-201ENST00000217109 4290 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
HOXD11P31277 BTN2A2-201ENST00000352867 3241 ntTSL 2 BASIC8.71□□□□□ -1.02
HOXD11P31277 NPHP1-207ENST00000445609 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
HOXD11P31277 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
HOXD11P31277 MBTD1-203ENST00000415868 5099 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
HOXD11P31277 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
HOXD11P31277 MAPK10-228ENST00000512689 2583 ntTSL 5 BASIC8.7□□□□□ -1.02
HOXD11P31277 RNF141-201ENST00000265981 4074 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
HOXD11P31277 AC007938.2-201ENST00000604666 2634 ntBASIC8.7□□□□□ -1.02
HOXD11P31277 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 284.7 ms